RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 SYNPRQ8TBG9 265 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 PHF21AQ96BD5 680 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 CCDC3Q9BQI4 270 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 NXF5Q9H1B4 397 aaKnown RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 SHOXO15266 292 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 IL33O95760 270 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 DDAH2O95865 285 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 CD14P08571 375 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 RPL4P36578 427 aaKnown RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 CAPZBP47756 277 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 ALKBH1Q13686 389 aaKnown RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 EXOSC2Q13868 293 aaKnown RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 ZNHIT3Q15649 155 aaPredicted RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 LRRC69Q6ZNQ3 347 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 ESX1Q8N693 406 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 ZNF721Q8TF20 911 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 DGAT2Q96PD7 388 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 ELF4Q99607 663 aaPredicted RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 SEC22CQ9BRL7 303 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 SPRTNQ9H040 489 aaPredicted RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 V9GY05 133 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 KIF26BQ2KJY2 2108 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 BLOC1S5-TXNDC5H3BN57 136 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 ZNF254O75437 659 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 MTRF1O75570 445 aaKnown RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 PPM1BO75688 479 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 BGLAPP02818 100 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 PROS1P07225 676 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 THEGLP0DJG4 465 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 VSIG10L2P0DP72 767 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 CXCL2P19875 107 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 ALOX5APP20292 161 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 GALNSP34059 522 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 PRPS1P60891 318 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 ZNF117Q03924 483 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 STX4Q12846 297 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 ESCO2Q56NI9 601 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 KIAA0895LQ68EN5 471 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 WBP2NLQ6ICG8 309 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 FAM166AQ6J272 317 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 LINGO2Q7L985 606 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 SLC36A1Q7Z2H8 476 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 TAF8Q7Z7C8 310 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 THEM6Q8WUY1 208 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 PCNPQ8WW12 178 aaKnown RBP8.92□□□□□ -0.98
MSH2-202ENST00000406134 MIB2Q96AX9 1013 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 RXFP3Q9NSD7 469 aa8.92□□□□□ -0.98
MSH2-202ENST00000406134 A0A1B0GUH1 482 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 TVP23AA6NH52 213 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 B4DGG1 531 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 ALDOBP05062 364 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 EPHA4P54764 986 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 TAS2R20P59543 309 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 EEF1A1P5Q5VTE0 462 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 GLDNQ6ZMI3 551 aaPredicted RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 C17orf82Q86X59 251 aaPredicted RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 FAM160A2Q8N612 972 aaPredicted RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 RBM18Q96H35 190 aaKnown RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 NKX3-1Q99801 234 aaPredicted RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 ULBP3Q9BZM4 244 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 SEMA4CQ9C0C4 833 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 MTIF3Q9H2K0 278 aaKnown RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 METTL17Q9H7H0 456 aaPredicted RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 UCKL1Q9NWZ5 548 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 PLSCR5A0PG75 271 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 OR5K4A6NMS3 321 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 ICMTO60725 284 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 ICOSLGO75144 302 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 SRSF10O75494 262 aaKnown RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 CALCBP10092 127 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 FASLGP48023 281 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 CCR5P51681 352 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 ZSWIM7Q19AV6 140 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 Q499Y3 187 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 ALG10Q5BKT4 473 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 SIGIRRQ6IA17 410 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 OR2G2Q8NGZ5 317 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 PPP1R14AQ96A00 147 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 MARVELD3Q96A59 401 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 TOE1Q96GM8 510 aaKnown RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 OR10A4Q9H209 315 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 CHRDQ9H2X0 955 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 MRPL22Q9NWU5 206 aaKnown RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 PTTG3PQ9NZH4 202 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 TEKT2Q9UIF3 430 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 PCP4L1A6NKN8 68 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 TSC22D2O75157 780 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 GLSO94925 669 aaPredicted RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 RPP14O95059 124 aaKnown RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 UTS2O95399 124 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 PNPP00491 289 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 CD37P11049 281 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 ANXA7P20073 488 aaKnown RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 PSMB1P20618 241 aaKnown RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 HSD17B7P56937 341 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 CTXN1P60606 82 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 FAM69AQ5T7M9 428 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 NHLRC1Q6VVB1 395 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 MAMSTRQ6ZN01 415 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 238.6 ms