RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 REG3GQ6UW15 175 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 WASH2PQ6VEQ5 465 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 LPCAT2Q7L5N7 544 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 ADAMTSL2Q86TH1 951 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 AMZ2Q86W34 360 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 TRAPPC5Q8IUR0 188 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZNF547Q8IVP9 402 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 GVQW1Q8N7I0 195 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZNF781Q8N8C0 355 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZBTB44Q8NCP5 570 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR56A4Q8NGH8 313 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR52E1Q8NGJ3 308 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR1K1Q8NGR3 316 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR4Q3Q8NH05 313 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR2L2Q8NH16 312 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR4F5Q8NH21 305 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 RAB3IL1Q8TBN0 382 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 STAG3L4Q8TBR4 150 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 TCP10LQ8TDR4 215 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 RLN3Q8WXF3 142 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 ELMO1Q92556 727 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 KLK6Q92876 244 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMEM159Q96B96 161 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 RAB39BQ96DA2 213 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 CCDC126Q96EE4 140 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 MRPL57Q9BQC6 102 aaKnown RBP3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 TIMM29Q9BSF4 260 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR2AG1Q9H205 316 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 NT5DC2Q9H857 520 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 COG4Q9H9E3 785 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 CAB39LQ9H9S4 337 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 RDH14Q9HBH5 336 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 NKIRAS1Q9NYS0 192 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMCO1Q9UM00 188 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 CUL9Q8IWT3 2517 aa3.95□□□□□ -1.78
HMGB3P19-201ENST00000403971 KNTC1P50748 2209 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 HCFC1P51610 2035 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR2AG2A6NM03 316 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 SYCE1LA8MT33 242 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 IQCF5A8MTL0 148 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 MEI4A8MW99 385 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 GFYI3L273 518 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 LRP3O75074 770 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 SPAG7O75391 227 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 MTX2O75431 263 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 PSIP1O75475 530 aaKnown RBP3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 POP7O75817 140 aaKnown RBP3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 TNFP01375 233 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 IGHG3P01860 377 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 C8GP07360 202 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 HCKP08631 526 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 HOXD4P09016 255 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 GNSP15586 552 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 BCKDHBP21953 392 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 HPDP32754 393 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 ATP6V1E1P36543 226 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 MDH1P40925 334 aaKnown RBP3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 CASP9P55211 416 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 AP1S2P56377 157 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 CDKL1Q00532 357 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 ACY1Q03154 408 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 CSTF1Q05048 431 aaKnown RBP3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 ASPHQ12797 758 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 PPP1R8Q12972 351 aaKnown RBP3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 ACSBG2Q5FVE4 666 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 N4BP2L1Q5TBK1 243 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 HHATQ5VTY9 493 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 NKAIN2Q5VXU1 208 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 STEAP1BQ6NZ63 245 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 TTC23LQ6PF05 361 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 SBSNQ6UWP8 590 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 ABRAXAS1Q6UWZ7 409 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 UNC5DQ6UXZ4 953 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 CYHR1Q6ZMK1 362 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 RGS9BPQ6ZS82 235 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 Q6ZSR6 202 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC25A42Q86VD7 318 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 PARGQ86W56 976 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC22A9Q8IVM8 553 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 PHC2Q8IXK0 858 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 CPNE9Q8IYJ1 553 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMEM185AQ8NFB2 350 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 LKAAEAR1Q8TD35 194 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 EEF1AKMT1Q8WVE0 214 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 KCTD4Q8WVF5 259 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 ANKRD49Q8WVL7 239 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR1E3Q8WZA6 343 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 RASL10AQ92737 203 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 FOPNLQ96NB1 174 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 FAM111AQ96PZ2 611 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR2M4Q96R27 311 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 SELENOSQ9BQE4 189 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR52A5Q9H2C5 316 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 TM9SF3Q9HD45 589 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMEM216Q9P0N5 145 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 GALPQ9UBC7 116 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 COPS7AQ9UBW8 275 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 EMCNQ9ULC0 261 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 MGAT4AQ9UM21 535 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 STRAPQ9Y3F4 350 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms