RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 TIAL1Q01085 375 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 PPA1Q15181 289 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 COX15Q7KZN9 410 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 ELMOD2Q8IZ81 293 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 MORN4Q8NDC4 146 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 TSLPQ969D9 159 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 PIGQQ9BRB3 760 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 KLHL13Q9P2N7 655 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 CHRNA9Q9UGM1 479 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 G3V3Y1 287 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 SELENOFO60613 162 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 DPM1O60762 260 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 PSMB1P20618 241 aaKnown RBP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 HTR2AP28223 471 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 HTR4Q13639 388 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 MPEG1Q2M385 716 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 NIPAL3Q6P499 406 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 ADGRF3Q8IZF5 1079 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 LINC01555Q8NAE3 123 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 RRNAD1Q96FB5 475 aaKnown RBP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 RADILQ96JH8 1075 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 EMC9Q9Y3B6 208 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 TMEM184BQ9Y519 407 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 COL11A1P12107 1806 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 GREB1LQ9C091 1923 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 OR6C76A6NM76 312 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 TCN2P20062 427 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 YBX1P67809 324 aaKnown RBP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 FOXB2Q5VYV0 432 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 MKXQ8IYA7 352 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 SLC25A46Q96AG3 418 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 TMEFF2Q9UIK5 374 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 ETV7Q9Y603 341 aa13.06□□□□□ -0.32
PCDHGA11-201ENST00000398587 CABIN1Q9Y6J0 2220 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 GPX5O75715 221 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 UBCP0CG48 685 aaKnown RBP13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 ZNF793Q6ZN11 406 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 USP51Q70EK9 711 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 LYSMD2Q8IV50 215 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 BPIFB2Q8N4F0 458 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 C12orf45Q8N5I9 185 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 ZNF775Q96BV0 537 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 NDUFB11Q9NX14 153 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 M0R036 132 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 M0R082 166 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 DVL2O14641 736 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 IFNA5P01569 189 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 HTR5AP47898 357 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 AKR1C2P52895 323 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 MFAP5Q13361 173 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 EMC4Q5J8M3 183 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 ESPNLQ6ZVH7 1005 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 LINC00346Q8IVM7 164 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 UBALD2Q8IYN6 164 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 TMEM99Q8N816 258 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 ACBD4Q8NC06 268 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 OR5L1Q8NGL2 311 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 CPT1CQ8TCG5 803 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 OR2A14Q96R47 310 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 KIF13BQ9NQT8 1826 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 PLXNB2O15031 1838 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 DDAH2O95865 285 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 HOXC4P09017 264 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 CHRNB1P11230 501 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 HIST1H1CP16403 213 aaKnown RBP13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 PTBP1P26599 531 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 DIO1P49895 249 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 FXYD4P59646 89 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 IL13RA1P78552 427 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 LIPNQ5VXI9 398 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 PAQR6Q6TCH4 344 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 OR6V1Q8N148 313 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 SPIN2AQ99865 258 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 SPIN2BQ9BPZ2 258 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 LRRC61Q9BV99 259 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 KCND3Q9UK17 655 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 TRPM6Q9BX84 2022 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 GPR171O14626 319 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 PEX14O75381 377 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 CPEP16870 476 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 LYPD4Q6UWN0 246 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 LRRC69Q6ZNQ3 347 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 IL17RDQ8NFM7 739 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 PDCD1LG2Q9BQ51 273 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 FKRPQ9H9S5 495 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 OSGIN1Q9UJX0 560 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 PCDHGA3Q9Y5H0 932 aa13.05□□□□□ -0.32
PCDHGA11-201ENST00000398587 C2orf72A6NCS6 295 aa13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 SLC2A10O95528 541 aa13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 CD53P19397 219 aa13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 SDHAP31040 664 aa13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 TCTN1Q2MV58 587 aa13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 SOWAHCQ53LP3 525 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 CMTM1Q8IZ96 169 aa13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 BEST4Q8NFU0 473 aa13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 PPP1R35Q8TAP8 253 aa13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 DYNC2LI1Q8TCX1 351 aa13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 FER1L6-AS2Q96M78 137 aa13.04□□□□□ -0.32
PCDHGA11-201ENST00000398587 MFFQ9GZY8 342 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms