RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 OR7E24Q6IFN5 339 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 RBMS3Q6XE24 437 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 ZNF433Q8N7K0 673 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 SNX33Q8WV41 574 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 CMTM3Q96MX0 182 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 CERS4Q9HA82 394 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 FLRT3Q9NZU0 649 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 KLHL9Q9P2J3 617 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 C19orf53Q9UNZ5 99 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 PCDHGA5Q9Y5G8 931 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 ATG2BQ96BY7 2078 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 PSMD9O00233 223 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 OGG1O15527 345 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 KRT33AO76009 404 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 IFNGP01579 166 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 UCHL1P09936 223 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 HIST1H1CP16403 213 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 GABRA3P34903 492 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 LBX1P52954 281 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 ART1P52961 327 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 CLDN12P56749 244 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 RPS15AP62244 130 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 SIRPAP78324 504 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 SGCGQ13326 291 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 UBE2NLQ5JXB2 153 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 OR52I2Q8NH67 350 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 PAPOLGQ9BWT3 736 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 NOX4Q9NPH5 578 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 POT1Q9NUX5 634 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 HAO2Q9NYQ3 351 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 DAPP1Q9UN19 280 aa14.6□□□□□ -0.07
CHMP1A-201ENST00000397901 A0A1B0GWA3 101 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 ACOD1A6NK06 481 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 IMPA2O14732 288 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 B3GALT2O43825 422 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 NDUFB6O95139 128 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 HEXAP06865 529 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 PTHLHP12272 177 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 PRF1P14222 555 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 TLX1P31314 330 aaPredicted RBP14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 SLC6A6P31641 620 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 GJA4P35212 333 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 FBXO42Q6P3S6 717 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 FAM122BQ7Z309 247 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 SLC2A12Q8TD20 617 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 EDARADDQ8WWZ3 215 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 CNN2Q99439 309 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 SEBOXQ9HB31 216 aaPredicted RBP14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 NRIP3Q9NQ35 241 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 MKL2Q9ULH7 1088 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 TRBV23-1A0A0A0MS06 115 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 MEX3AA1L020 520 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 IDSB3KWA1 339 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 OC90Q02509 493 aaPredicted RBP14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 POU4F2Q12837 409 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 MPPED2Q15777 294 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 FHL5Q5TD97 284 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 FAAP20Q6NZ36 180 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 ARHGAP11AQ6P4F7 1023 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 PRSS41Q7RTY9 318 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 SLC35F2Q8IXU6 374 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 TMEM52Q8NDY8 209 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 OR52B4Q8NGK2 314 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 ZNRF4Q8WWF5 429 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 ASB13Q8WXK3 278 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 ADAT1Q9BUB4 502 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 FGF22Q9HCT0 170 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 TBC1D29Q9UFV1 150 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 KLF15Q9UIH9 416 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 SLC17A4Q9Y2C5 497 aa14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 CARHSP1Q9Y2V2 147 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 MRPS2Q9Y399 296 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-201ENST00000397901 A0A0D9SG52 128 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 ANKRD20A5PA0PJZ0 165 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 UBE2CO00762 179 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 FGF17O60258 216 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 CTSVO60911 334 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 AKR7A3O95154 331 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 ACHEP22303 614 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 AK4P27144 223 aaPredicted RBP14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 IGFALSP35858 605 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 RUNX3Q13761 415 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 C9orf50Q5SZB4 431 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 C10orf91Q5T1B1 145 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 FCAMRQ8WWV6 532 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 SERINC2Q96SA4 455 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 ZNF559Q9BR84 538 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 KLK11Q9UBX7 282 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 ADAM18Q9Y3Q7 739 aa14.58□□□□□ -0.07
CHMP1A-201ENST00000397901 XIRP2A4UGR9 3374 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 A0A0B4J2E0 115 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 A0A1B0GX12 115 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 PRR19A6NJB7 356 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 TTLL8A6PVC2 850 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 GOSR2O14653 212 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 FMO6PO60774 539 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 FBP1P09467 338 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 CT62P0C5K7 136 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 FOLR2P14207 255 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 ADCYAP1P18509 176 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms