RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 COX5BP10606 129 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF24P17028 368 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 SSTR4P31391 388 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 YAP1P46937 504 aaKnown RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 RRADP55042 308 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 QPRTQ15274 297 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 LPCAT3Q6P1A2 487 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 LUZP2Q86TE4 346 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 SPNS2Q8IVW8 549 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 MMP21Q8N119 569 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ESX1Q8N693 406 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PHOSPHO1Q8TCT1 267 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ERMAPQ96PL5 475 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 OR5B2Q96R09 309 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 WDR77Q9BQA1 342 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PRSS37A4D1T9 235 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 KHNYNO15037 678 aaKnown RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 NARSO43776 548 aaKnown RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 GSTT2BP0CG30 244 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 GTF2E2P29084 291 aaKnown RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 RAB14P61106 215 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 LYSMD2Q8IV50 215 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 C9orf40Q8IXQ3 194 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 BOD1Q96IK1 185 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 C4orf45Q96LM5 186 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 DCBLD2Q96PD2 775 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 DEPDC7Q96QD5 511 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 HDHD2Q9H0R4 259 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 CHST11Q9NPF2 352 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ESPL1Q14674 2120 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 TMED7-TICAM2A0A0A6YYA0 188 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 LOC100506127A0A0U1RQW1 187 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 WWP2O00308 870 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 RGS13O14921 159 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 BGLAPP02818 100 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 CSRP1P21291 193 aaKnown RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PYCR1P32322 319 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PSMA6P60900 246 aaKnown RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 CAMK2DQ13557 499 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF791Q3KP31 576 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF627Q7L945 461 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PLCZ1Q86YW0 608 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PARP16Q8N5Y8 322 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 OR56B4Q8NH76 319 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 HCN3Q9P1Z3 774 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 FUOMA2VDF0 154 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 CEACAM18A8MTB9 384 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 GABARAPH6UMI1 98 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PEX12O00623 359 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 CASKO14936 926 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 AKR7A2O43488 359 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF780AO75290 641 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 SHBQ15464 509 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 TMEM255BQ8WV15 326 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 CCDC74AQ96AQ1 378 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PGLYRP3Q96LB9 341 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 C11orf16Q9NQ32 467 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PLEKHA6Q9Y2H5 1048 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 USP9XQ93008 2570 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 TRABD2BA6NFA1 517 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ACOT7O00154 380 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 CLPSP04118 112 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 SLC6A1P30531 599 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 TNFSF8P32971 234 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 SSPNQ14714 243 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 THSD4Q6ZMP0 1018 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 FADS6Q8N9I5 356 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PLPP7Q8NBV4 271 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF519Q8TB69 540 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 SMPDL3BQ92485 455 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 SLC25A44Q96H78 314 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 NAA11Q9BSU3 229 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 TSPAN10Q9H1Z9 355 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 MCUBQ9NWR8 336 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 GRHPRQ9UBQ7 328 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 PHF3Q92576 2039 aaKnown RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 A0A1W2PQM1 296 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ALDOBP05062 364 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 TACR3P29371 465 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 FAM166AQ6J272 317 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 JAZF1Q86VZ6 243 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 OR51G2Q8NGK0 314 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 FAM216AQ8WUB2 273 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 THAP4Q8WY91 577 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 GTF3AQ92664 365 aaKnown RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 NUDT9Q9BW91 350 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 CD93Q9NPY3 652 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 DDX28Q9NUL7 540 aaKnown RBP5.31□□□□□ -1.56
PTPRD-206ENST00000397617 IGKV3D-15A0A087WSY6 115 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 SOX14O95416 240 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 HNRNPCP07910 306 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 HOXD11P31277 338 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 RPL4P36578 427 aaKnown RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 SUCLG1P53597 346 aaKnown RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 PCBD1P61457 104 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 C1orf61Q13536 156 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 TRIQKQ629K1 86 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 NHLRC1Q6VVB1 395 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ESPNLQ6ZVH7 1005 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 TPSD1Q9BZJ3 242 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms