RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 FTCDNL1E5RQL4 147 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 PSMD9O00233 223 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 PHYHO14832 338 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 SSX4O60224 188 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 AKR7A3O95154 331 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 KRT8P05787 483 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 GP1BAP07359 652 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 CCL4P13236 92 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 THBS2P35442 1172 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 RPS11P62280 158 aaKnown RBP eCLIP13.49□□□□□ -0.25
CBX3-202ENST00000396386 RIN1Q13671 783 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 TAB1Q15750 504 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 LPAL2Q16609 132 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 BTBD16Q32M84 506 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 LRRC28Q86X40 367 aaPredicted RBP13.49□□□□□ -0.25
CBX3-202ENST00000396386 YIPF7Q8N8F6 280 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 OR10G3Q8NGC4 313 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 PHYHIPQ92561 330 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 DDIT4LQ96D03 193 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 SPACA9Q96E40 222 aaPredicted RBP13.49□□□□□ -0.25
CBX3-202ENST00000396386 OR14A2Q96R54 314 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 PDCD1LG2Q9BQ51 273 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 ULBP3Q9BZM4 244 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 SMOC1Q9H4F8 434 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 PPP1R3EQ9H7J1 279 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 VSX1Q9NZR4 365 aaPredicted RBP13.49□□□□□ -0.25
CBX3-202ENST00000396386 RASD1Q9Y272 281 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 WIF1Q9Y5W5 379 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 ZNF879B4DU55 563 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 SNPHO15079 494 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 FLRT2O43155 660 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 ZNF208O43345 1280 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 LDOC1O95751 146 aaPredicted RBP13.48□□□□□ -0.25
CBX3-202ENST00000396386 APEX1P27695 318 aaKnown RBP13.48□□□□□ -0.25
CBX3-202ENST00000396386 CENPAP49450 140 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 MADCAM1Q13477 382 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 NTRK2Q16620 822 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 TRIQKQ629K1 86 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 FAM199XQ6PEV8 388 aaPredicted RBP13.48□□□□□ -0.25
CBX3-202ENST00000396386 ARSKQ6UWY0 536 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 SCAIQ8N9R8 606 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 MFSD8Q8NHS3 518 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 ELP5Q8TE02 316 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 ITPKCQ96DU7 683 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 RASL10BQ96S79 203 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 NPAS1Q99742 590 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 SLC22A4Q9H015 551 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 EXTL2Q9UBQ6 330 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 MRM2Q9UI43 246 aaKnown RBP13.48□□□□□ -0.25
CBX3-202ENST00000396386 ZNF281Q9Y2X9 895 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 PTRH2Q9Y3E5 179 aaKnown RBP13.48□□□□□ -0.25
CBX3-202ENST00000396386 TMEM221A6NGB7 291 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 HSPB2A8KAH6 182 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 M0R296 226 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 ETV2O00321 342 aaPredicted RBP13.48□□□□□ -0.25
CBX3-202ENST00000396386 SEC14L5O43304 696 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 ABHD16AO95870 558 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 SLC2A2P11168 524 aaPredicted RBP13.48□□□□□ -0.25
CBX3-202ENST00000396386 ELK1P19419 428 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 PTGDSP41222 190 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 BLVRAP53004 296 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 EGR3Q06889 387 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 PUDPQ08623 228 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 HSPB2Q16082 182 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 HSD17B12Q53GQ0 312 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 YIF1BQ5BJH7 314 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 IL20RBQ6UXL0 311 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 NRARPQ7Z6K4 114 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 TRMT10AQ8TBZ6 339 aaKnown RBP13.48□□□□□ -0.25
CBX3-202ENST00000396386 ATOH1Q92858 354 aaPredicted RBP13.48□□□□□ -0.25
CBX3-202ENST00000396386 TXNDC15Q96J42 360 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 MRGPRX4Q96LA9 322 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 UBL7Q96S82 380 aaPredicted RBP13.48□□□□□ -0.25
CBX3-202ENST00000396386 MFRPQ9BY79 579 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 IKZF2Q9UKS7 526 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 B9D1Q9UPM9 204 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 HRH3Q9Y5N1 445 aa13.48□□□□□ -0.25
CBX3-202ENST00000396386 IGHV1-45A0A0A0MS14 117 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 NOTOA8MTQ0 251 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 UPK3AO75631 287 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 RPP14O95059 124 aaKnown RBP13.47□□□□□ -0.25
CBX3-202ENST00000396386 HLA-DQB1P01920 261 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 UMODP07911 640 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 ZNF883P0CG24 379 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 IL11P20809 199 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 ACP1P24666 158 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 TALDO1P37837 337 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 MPLP40238 635 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 RFX2P48378 723 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 MAP2K6P52564 334 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 NANOS3P60323 173 aaKnown RBP13.47□□□□□ -0.25
CBX3-202ENST00000396386 ZP4Q12836 540 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 MELKQ14680 651 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 P2RY14Q15391 338 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 OR7A5Q15622 319 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 EXT1Q16394 746 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 PLPPR5Q32ZL2 321 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 SLC25A35Q3KQZ1 300 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 SLC25A53Q5H9E4 307 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 UNQ9370/PRO34162Q6UXP9 181 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms