RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PLPP2O43688 288 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SPARCP09486 303 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ZP2Q05996 745 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RNPS1Q15287 305 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SF3A2Q15428 464 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SLC46A3Q7Z3Q1 461 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF100Q8IYN0 542 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 KCNG3Q8TAE7 436 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PHOX2BQ99453 314 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 VN1R1Q9GZP7 353 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 QRSL1Q9H0R6 528 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 TMEFF2Q9UIK5 374 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SPATA2Q9UM82 520 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 CARD8Q9Y2G2 431 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 GPR52Q9Y2T5 361 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF878C9JN71 531 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RAD51DO75771 328 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 LCKP06239 509 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ARSBP15848 533 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF17P17021 662 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 STOMP27105 288 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 CRMP1Q14194 572 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 VWA2Q5GFL6 755 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 CHPT1Q8WUD6 406 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 POM121Q96HA1 1249 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 NIPSNAP1Q9BPW8 284 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 NTN4Q9HB63 628 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ERVK-18Q9QC07 812 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 VDAC3Q9Y277 283 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 TRAV17A0A0B4J275 112 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ACOD1A6NK06 481 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 C11orf98E9PRG8 122 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SYT7O43581 403 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SLC16A7O60669 478 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 MRPL33O75394 65 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SMIM10L1P0DMW3 83 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 CA5AP35218 305 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ENTPD1P49961 510 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 UBE2NP61088 152 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RAC1P63000 192 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 COL28A1Q2UY09 1125 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PERM1Q5SV97 790 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF584Q8IVC4 421 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PPP1R14AQ96A00 147 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 SMIM10Q96HG1 83 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 C4orf36Q96KX1 117 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF582Q96NG8 517 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 PILRAQ9UKJ1 303 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 MGAT4AQ9UM21 535 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 COLQQ9Y215 455 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 EMC9Q9Y3B6 208 aa3.1□□□□□ -1.91
VPS13C-203ENST00000395896 RBM7Q9Y580 266 aaKnown RBP3.1□□□□□ -1.91
VPS13C-203ENST00000395896 H3BML4 177 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 GABARAPH6UMI1 98 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 UPK1BO75841 260 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CHRM4P08173 479 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 TNFRSF1BP20333 461 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 METAP1P53582 386 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SLC37A1P57057 533 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CLN3Q13286 438 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM205Q6UW68 189 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 BCORP1Q8N888 145 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CSNK2A3Q8NEV1 391 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RBM24Q9BX46 236 aaKnown RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 OR10A2Q9H208 303 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 FARSAQ9Y285 508 aaKnown RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 A0A0X1KG70 313 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 TRIM64BA6NI03 449 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 FIGNL2A6NMB9 653 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SURF4O15260 269 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 TRAPPC2P0DI81 140 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 TRAPPC2BP0DI82 140 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RUNX2Q13950 521 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 GAB4Q2WGN9 574 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 OR5M3Q8NGP4 307 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SLC17A5Q9NRA2 495 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 FAM86C1Q9NVL1 165 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 EXTL2Q9UBQ6 330 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CRYABP02511 175 aaKnown RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CCR9P51686 369 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 NCS1P62166 190 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 DOC2BQ14184 412 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RBM39Q14498 530 aaKnown RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF74Q16587 644 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 NKG7Q16617 165 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 HYLS1Q96M11 299 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 DDA1Q9BW61 102 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SLC26A1Q9H2B4 701 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RHBDL2Q9NX52 303 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 ERVK13-1Q9NX77 482 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 PCDHGA3Q9Y5H0 932 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 TRAV1-2A0A0B4J238 106 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 B4GAT1O43505 415 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SUSD5O60279 629 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 PPP1R3DO95685 299 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 PTGER4P35408 488 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RAB39BQ96DA2 213 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 DHRS1Q96LJ7 313 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 GINS4Q9BRT9 223 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SF3B5Q9BWJ5 86 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms