RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ZNF99A8MXY4 864 aaPredicted RBP11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 H0YL77 283 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 FAAHO00519 579 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 PLIN3O60664 434 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 SLC43A1O75387 559 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 SPAG7O75391 227 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 AK1P00568 194 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 VIMP08670 466 aaKnown RBP11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 DRD4P21917 467 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 TACR3P29371 465 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 SLC6A9P48067 706 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 SEC61A1P61619 476 aaKnown RBP11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 COL10A1Q03692 680 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 ZSCAN26Q16670 478 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 IMPG1Q17R60 797 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 GSG1Q2KHT4 349 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 HFEQ30201 348 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 TRMT5Q32P41 509 aaKnown RBP11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 TYW3Q6IPR3 259 aaKnown RBP11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 TMEM154Q6P9G4 183 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 Q6YL49 198 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 ZNF771Q7L3S4 317 aaPredicted RBP11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 ST7LQ8TDW4 575 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 STON2Q8WXE9 905 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 C7orf26Q96N11 449 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 TSSK3Q96PN8 268 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 MRI1Q9BV20 369 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 NPHS2Q9NP85 383 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 SLC7A8Q9UHI5 535 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 BAIAP2L1Q9UHR4 511 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 ATP6V1HQ9UI12 483 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 NOX1Q9Y5S8 564 aa11.51□□□□□ -0.57
VCPKMT-201ENST00000395859 HYDINQ4G0P3 5121 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 AGAP5A6NIR3 686 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 CLDN24A6NM45 220 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 F5H0A9 414 aaPredicted RBP11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 FRS3O43559 492 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 FZD7O75084 574 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 SEC22BO75396 215 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 IGHV2-70P01814 119 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 CRYBA1P05813 215 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 BPGMP07738 259 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 CSF1P09603 554 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 MAKP20794 623 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 PHYHD1Q5SRE7 291 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 TMEM225Q6GV28 225 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 CCBE1Q6UXH8 406 aaPredicted RBP11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 NUDCD3Q8IVD9 361 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 CLHC1Q8NHS4 586 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 OR5P2Q8WZ92 322 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 CNOT9Q92600 299 aaKnown RBP11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 PPP1R14AQ96A00 147 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 WWC2-AS2Q96NR7 200 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 RASSF4Q9H2L5 321 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 DENND2DQ9H6A0 471 aaPredicted RBP11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 MARCH7Q9H992 704 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 MID1IP1Q9NPA3 183 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 NECAP2Q9NVZ3 263 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 C1orf109Q9NX04 203 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 UBAP1Q9NZ09 502 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 B3GAT1Q9P2W7 334 aa11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 TET2Q6N021 2002 aaPredicted RBP11.5□□□□□ -0.57
VCPKMT-201ENST00000395859 TMEM114B3SHH9 223 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 FTCDNL1E5RQL4 147 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 SNX3O60493 162 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 EDF1O60869 148 aaKnown RBP11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 NPIPB7O75200 414 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 PROCP04070 461 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 CHRM4P08173 479 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 TROVE2P10155 538 aaKnown RBP eCLIP11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 MYL2P10916 166 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 LAMP1P11279 417 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 NEFHP12036 1026 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 CAPZA2P47755 286 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 RPS26P62854 115 aaKnown RBP11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 KCNJ10P78508 379 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 FUT5Q11128 374 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 RFTN2Q52LD8 501 aaPredicted RBP11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 RGS7BPQ6MZT1 257 aaPredicted RBP11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 TMEM123Q8N131 208 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 CCDC197Q8NCU1 140 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 OR2T11Q8NH01 316 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 MGARPQ8TDB4 240 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 ZBTB9Q96C00 473 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 ELMOD3Q96FG2 381 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 PAIP2Q9BPZ3 127 aaKnown RBP11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 SAP30LQ9HAJ7 183 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 PATZ1Q9HBE1 687 aaKnown RBP11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 NOX4Q9NPH5 578 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 MRGBPQ9NV56 204 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 THAP1Q9NVV9 213 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 KLHL14Q9P2G3 628 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 RASD1Q9Y272 281 aa11.49□□□□□ -0.57
VCPKMT-201ENST00000395859 STAB2Q8WWQ8 2551 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 SERPINE1P05121 402 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 MELTFP08582 738 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 CPA3P15088 417 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 GIPRP48546 466 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 KLF3P57682 345 aaPredicted RBP11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 GALK2Q01415 458 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms