RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 ZP4Q12836 540 aa13.99□□□□□ -0.17
CXCL12-206ENST00000395795 CAMK2DQ13557 499 aa13.99□□□□□ -0.17
CXCL12-206ENST00000395795 C6orf52Q5T4I8 152 aa13.99□□□□□ -0.17
CXCL12-206ENST00000395795 PATL1Q86TB9 770 aaKnown RBP13.99□□□□□ -0.17
CXCL12-206ENST00000395795 VANGL1Q8TAA9 524 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-206ENST00000395795 MS4A3Q96HJ5 214 aa13.99□□□□□ -0.17
CXCL12-206ENST00000395795 ZNF583Q96ND8 569 aa13.99□□□□□ -0.17
CXCL12-206ENST00000395795 ASPNQ9BXN1 380 aa13.99□□□□□ -0.17
CXCL12-206ENST00000395795 SAR1AQ9NR31 198 aa13.99□□□□□ -0.17
CXCL12-206ENST00000395795 YAE1D1Q9NRH1 226 aa13.99□□□□□ -0.17
CXCL12-206ENST00000395795 SLC7A7Q9UM01 511 aa13.99□□□□□ -0.17
CXCL12-206ENST00000395795 MALRD1Q5VYJ5 2156 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 B9A039 149 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 CH25HO95992 272 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 IGHV4-31P0DP07 118 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 ZNF35P13682 527 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 IFNGR1P15260 489 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 NQO1P15559 274 aaKnown RBP13.98□□□□□ -0.17
CXCL12-206ENST00000395795 TNFRSF1BP20333 461 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 ARR3P36575 388 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 KLF10Q13118 480 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 LRFN4Q6PJG9 635 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 SLC30A8Q8IWU4 369 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 OR4F15Q8NGB8 312 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 RNF217Q8TC41 542 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 PROX1Q92786 737 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 LRRC58Q96CX6 371 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 FGFR1OP2Q9NVK5 253 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 SLC13A4Q9UKG4 626 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 PMF1-BGLAPU3KQ54 211 aa13.98□□□□□ -0.17
CXCL12-206ENST00000395795 TRAPPC13A5PLN9 417 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 AKAP8O43823 692 aaKnown RBP13.97□□□□□ -0.17
CXCL12-206ENST00000395795 B4GALT1P15291 398 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 PPOXP50336 477 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 IL1RL1Q01638 556 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 COQ5Q5HYK3 327 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 REP15Q6BDI9 236 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 VHLLQ6RSH7 139 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 ZNF584Q8IVC4 421 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 NKAIN4Q8IVV8 208 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 CCDC36Q8IYA8 594 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 ZCCHC24Q8N2G6 241 aaKnown RBP13.97□□□□□ -0.17
CXCL12-206ENST00000395795 OR8J3Q8NGG0 315 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 OR6X1Q8NH79 312 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 SEPHS2Q99611 448 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 MOV10Q9HCE1 1003 aaKnown RBP13.97□□□□□ -0.17
CXCL12-206ENST00000395795 SELENONQ9NZV5 590 aa13.97□□□□□ -0.17
CXCL12-206ENST00000395795 GMPR2Q9P2T1 348 aaKnown RBP13.97□□□□□ -0.17
CXCL12-206ENST00000395795 IGHV4-61A0A0C4DH41 118 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 A8MV72 311 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-206ENST00000395795 C11orf98E9PRG8 122 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 DYNC1I1O14576 645 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 SERPINI2O75830 405 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 CSF3P09919 207 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 TSPAN19P0C672 248 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 ADORA3P0DMS8 318 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 NR4A1P22736 598 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 NR4A2P43354 598 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 UGT2B15P54855 530 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 BIDP55957 195 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 SNRPD2P62316 118 aaKnown RBP13.96□□□□□ -0.17
CXCL12-206ENST00000395795 RUNX1T1Q06455 604 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 SF3A3Q12874 501 aaKnown RBP eCLIP13.96□□□□□ -0.17
CXCL12-206ENST00000395795 NPRL3Q12980 569 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 HIST3H3Q16695 136 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 ZNF813Q6ZN06 617 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 SLC35D2Q76EJ3 337 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 CARM1Q86X55 608 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 C10orf53Q8N6V4 93 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 MPP4Q96JB8 637 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 FOXN4Q96NZ1 517 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 FOXB1Q99853 325 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 ULBP2Q9BZM5 246 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 SLC19A3Q9BZV2 496 aa13.96□□□□□ -0.17
CXCL12-206ENST00000395795 COL6A5A8TX70 2615 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 SVEP1Q4LDE5 3571 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 KPNA4O00629 521 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-206ENST00000395795 ATP8B1O43520 1251 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 TP53P04637 393 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-206ENST00000395795 PATE4P0C8F1 98 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 PGA4P0DJD7 388 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 PGA3P0DJD8 388 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 BMP4P12644 408 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 NPR2P20594 1047 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 USF1P22415 310 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-206ENST00000395795 AHCYP23526 432 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 LSM11P83369 360 aaKnown RBP eCLIP13.95□□□□□ -0.18
CXCL12-206ENST00000395795 CYLC2Q14093 348 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-206ENST00000395795 MELKQ14680 651 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 FXNQ16595 210 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 SKA3Q8IX90 412 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 CDK20Q8IZL9 346 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 SVOPLQ8N434 492 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 PFN4Q8NHR9 129 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 NMD3Q96D46 503 aaKnown RBP13.95□□□□□ -0.18
CXCL12-206ENST00000395795 KCNS3Q9BQ31 491 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 SOX7Q9BT81 388 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 MRPL13Q9BYD1 178 aaKnown RBP13.95□□□□□ -0.18
CXCL12-206ENST00000395795 C20orf141Q9NUB4 165 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 GLTPQ9NZD2 209 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms