RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 MRPS18AQ9NVS2 196 aaKnown RBP13.47□□□□□ -0.25
PTPN20-206ENST00000395722 MED29Q9NX70 200 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 SCN3BQ9NY72 215 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 TNFRSF10DQ9UBN6 386 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 ACACBO00763 2458 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 ALPK2Q86TB3 2170 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 PRSS37A4D1T9 235 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 OR14I1A6ND48 311 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 CCDC182A6NF36 153 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 TRIM64CA6NLI5 447 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 CLCA1A8K7I4 914 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 AHCYL1O43865 530 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 SMIM18P0DKX4 95 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 PIPP12273 146 aaPredicted RBP13.47□□□□□ -0.25
PTPN20-206ENST00000395722 ZNF43P17038 809 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 HTR1FP30939 366 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 RUNX1T1Q06455 604 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 TMED1Q13445 227 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 C1DQ13901 141 aaKnown RBP13.47□□□□□ -0.25
PTPN20-206ENST00000395722 FAM180AQ6UWF9 173 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 CREB3L2Q70SY1 520 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 ADGRE4PQ86SQ3 457 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 GPAT4Q86UL3 456 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 OR6X1Q8NH79 312 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 RNF128Q8TEB7 428 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 IPCEF1Q8WWN9 437 aaPredicted RBP13.47□□□□□ -0.25
PTPN20-206ENST00000395722 ROBO4Q8WZ75 1007 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 SGCDQ92629 289 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 GGHQ92820 318 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 KISS1RQ969F8 398 aaPredicted RBP13.47□□□□□ -0.25
PTPN20-206ENST00000395722 SARAFQ96BY9 339 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 KCNK17Q96T54 332 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 MRPL13Q9BYD1 178 aaKnown RBP13.47□□□□□ -0.25
PTPN20-206ENST00000395722 CNOT2Q9NZN8 540 aaKnown RBP13.47□□□□□ -0.25
PTPN20-206ENST00000395722 ING1Q9UK53 422 aaPredicted RBP13.47□□□□□ -0.25
PTPN20-206ENST00000395722 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTPN20-206ENST00000395722 RPL36Q9Y3U8 105 aaKnown RBP13.47□□□□□ -0.25
PTPN20-206ENST00000395722 PKD1L2Q7Z442 2459 aa13.47□□□□□ -0.25
PTPN20-206ENST00000395722 PIEZO2Q9H5I5 2752 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 IGKV3D-15A0A087WSY6 115 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 SNTNA6NMZ2 147 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 XKRYO14609 159 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 ARHGEF9O43307 516 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 HTR1AP08908 422 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 DBTP11182 482 aaKnown RBP13.46□□□□□ -0.25
PTPN20-206ENST00000395722 CDH11P55287 796 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 APOFQ13790 326 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 KRTCAP3Q53RY4 240 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 MEPCEQ7L2J0 689 aaKnown RBP13.46□□□□□ -0.25
PTPN20-206ENST00000395722 HDDC2Q7Z4H3 204 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 FGD2Q7Z6J4 655 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 ADAD1Q96M93 576 aaKnown RBP13.46□□□□□ -0.25
PTPN20-206ENST00000395722 TUBA1CQ9BQE3 449 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 CAMK2AQ9UQM7 478 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 ZNF175Q9Y473 711 aa13.46□□□□□ -0.25
PTPN20-206ENST00000395722 A0A1B0GTH9 108 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 SLC22A23A1A5C7 686 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 EFCAB10A6NFE3 127 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 MRPS14O60783 128 aaKnown RBP13.45□□□□□ -0.26
PTPN20-206ENST00000395722 TRMUO75648 421 aaKnown RBP13.45□□□□□ -0.26
PTPN20-206ENST00000395722 SYNGR4O95473 234 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 RENP00797 406 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 SPI1P17947 270 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 TDGF1P3P51864 188 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 BIDP55957 195 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 PM20D2Q8IYS1 436 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 TSPAN14Q8NG11 270 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 OR9Q1Q8NGQ5 310 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 NMD3Q96D46 503 aaKnown RBP13.45□□□□□ -0.26
PTPN20-206ENST00000395722 ALG12Q9BV10 488 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 SLC25A18Q9H1K4 315 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 HAO2Q9NYQ3 351 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 H2AFY2Q9P0M6 372 aaPredicted RBP13.45□□□□□ -0.26
PTPN20-206ENST00000395722 WARS2Q9UGM6 360 aaKnown RBP13.45□□□□□ -0.26
PTPN20-206ENST00000395722 MCTS1Q9ULC4 181 aaKnown RBP13.45□□□□□ -0.26
PTPN20-206ENST00000395722 FLVCR1Q9Y5Y0 555 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 CENPBD1B2RD01 187 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 NPIPA2E9PIF3 369 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 NPIPA3F8WFD2 350 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 H7C1C5 153 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 CLUP10909 449 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 CDH15P55291 814 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 LCN6P62502 163 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 PON3Q15166 354 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 SLC35D3Q5M8T2 416 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 ZNF773Q6PK81 442 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 GHDCQ8N2G8 530 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 ZNF540Q8NDQ6 660 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 SLC25A44Q96H78 314 aaPredicted RBP13.45□□□□□ -0.26
PTPN20-206ENST00000395722 ZNF385AQ96PM9 386 aaKnown RBP13.45□□□□□ -0.26
PTPN20-206ENST00000395722 TEAD3Q99594 435 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 SYT4Q9H2B2 425 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 RNF122Q9H9V4 155 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 CCNB1IP1Q9NPC3 277 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 ASB6Q9NWX5 421 aa13.45□□□□□ -0.26
PTPN20-206ENST00000395722 TPRP12270 2363 aaKnown RBP13.44□□□□□ -0.26
PTPN20-206ENST00000395722 SLC35F4A4IF30 521 aa13.44□□□□□ -0.26
PTPN20-206ENST00000395722 SLC22A31A6NKX4 558 aa13.44□□□□□ -0.26
PTPN20-206ENST00000395722 PTGES3LE9PB15 166 aa13.44□□□□□ -0.26
PTPN20-206ENST00000395722 AQP8O94778 261 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms