RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 DNPH1O43598 174 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 CHRNB4P30926 498 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 SIRPAP78324 504 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 RPL19P84098 196 aaKnown RBP7.4□□□□□ -1.22
ATXN3-203ENST00000393287 BDH1Q02338 343 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 PPP1R8Q12972 351 aaKnown RBP7.4□□□□□ -1.22
ATXN3-203ENST00000393287 AQP6Q13520 282 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 PWWP2BQ6NUJ5 590 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 PGBD2Q6P3X8 592 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 TMPRSS9Q7Z410 1059 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 OR6S1Q8NH40 331 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 CHPT1Q8WUD6 406 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 TMEM255BQ8WV15 326 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 RAB40AQ8WXH6 277 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 LMF1Q96S06 567 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 KCNS2Q9ULS6 477 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 OR6C6A6NF89 314 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 SLC16A6O15403 523 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 P2RX6O15547 441 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 BPNT1O95861 308 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 CLDN15P56746 228 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 FUNDC1Q8IVP5 155 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 OR51A2Q8NGJ7 313 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 CNOT9Q92600 299 aaKnown RBP7.4□□□□□ -1.22
ATXN3-203ENST00000393287 C8orf44Q96CB5 159 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF700Q9H0M5 742 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 METTL8Q9H825 291 aaKnown RBP7.4□□□□□ -1.22
ATXN3-203ENST00000393287 PMF1-BGLAPU3KQ54 211 aa7.4□□□□□ -1.22
ATXN3-203ENST00000393287 WNT1P04628 370 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 ALPLP05186 524 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 PTNP21246 168 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 LSSP48449 732 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 RAE1P78406 368 aaKnown RBP7.4□□□□□ -1.23
ATXN3-203ENST00000393287 PERM1Q5SV97 790 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 OR5M10Q6IEU7 315 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 NPEPL1Q8NDH3 523 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 OR5H2Q8NGV7 314 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 SF3B5Q9BWJ5 86 aaKnown RBP7.4□□□□□ -1.23
ATXN3-203ENST00000393287 SIAEQ9HAT2 523 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 ZNF226Q9NYT6 803 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 EXTL2Q9UBQ6 330 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 TRGV8A0A0C4DH27 118 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 DOK2O60496 412 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 MITFO75030 526 aaPredicted RBP7.4□□□□□ -1.23
ATXN3-203ENST00000393287 TSC22D2O75157 780 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 MYF5P13349 255 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 ECI1P42126 302 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 MECP2P51608 486 aaKnown RBP7.4□□□□□ -1.23
ATXN3-203ENST00000393287 TP53I3Q53FA7 332 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 KRTCAP3Q53RY4 240 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 TIGD3Q6B0B8 471 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 FAM57BQ71RH2 274 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 YRDCQ86U90 279 aaKnown RBP7.4□□□□□ -1.23
ATXN3-203ENST00000393287 ENTHD1Q8IYW4 607 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 FAM109AQ8N4B1 249 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 FCRL1Q96LA6 429 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 GABARAPL3Q9BY60 117 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 OR10A4Q9H209 315 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 ZNF701Q9NV72 531 aaPredicted RBP7.4□□□□□ -1.23
ATXN3-203ENST00000393287 QPCTLQ9NXS2 382 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 GPR52Q9Y2T5 361 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 ETV7Q9Y603 341 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 SIP14410 1827 aa7.4□□□□□ -1.23
ATXN3-203ENST00000393287 PRAMEF33A0A0G2JMD5 474 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 PRAMEF10O60809 474 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 RGS11O94810 467 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 CEACAM1P13688 526 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 ZNF133P52736 654 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-203ENST00000393287 BEND4Q6ZU67 534 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 RIMKLAQ8IXN7 391 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 CMTM1Q8IZ96 169 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 SAMD12Q8N8I0 201 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 FAM71F1Q96KD3 344 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-203ENST00000393287 ZNF582Q96NG8 517 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-203ENST00000393287 DCLRE1CQ96SD1 692 aaKnown RBP7.39□□□□□ -1.23
ATXN3-203ENST00000393287 FSCN3Q9NQT6 498 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 TBCCD1Q9NVR7 557 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 SH3BGRL2Q9UJC5 107 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 ZNF175Q9Y473 711 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 ZNF850A8MQ14 1090 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 SGCEO43556 437 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 CTSVO60911 334 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 LILRB5O75023 590 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 TOMM34Q15785 309 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-203ENST00000393287 SCGB2B2Q4G0G5 96 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 SYT14P1Q58G82 188 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 UBE2NLQ5JXB2 153 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 SERPINA12Q8IW75 414 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 OR56B1Q8NGI3 324 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 ISYNA1Q9NPH2 558 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 TMEM74BQ9NUR3 256 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 NDUFAF4Q9P032 175 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 GPR55Q9Y2T6 319 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-203ENST00000393287 LNP1A1A4G5 178 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 DCDC2BA2VCK2 349 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 ABHD16AO95870 558 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 GSTT2P0CG29 244 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 LAP3P28838 519 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 PTPN6P29350 595 aa7.39□□□□□ -1.23
ATXN3-203ENST00000393287 SOX3P41225 446 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms