RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 NAA10P41227 235 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 POLR2HP52434 150 aaKnown RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 PNLIPRP2P54317 469 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SLC26A5P58743 744 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 MAP4K2Q12851 820 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SGCGQ13326 291 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 MEX3DQ86XN8 651 aaKnown RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 GJD3Q8N144 294 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 GABRG1Q8N1C3 465 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 OR10AD1Q8NGE0 317 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 THAP4Q8WY91 577 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 MRPL38Q96DV4 380 aaKnown RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SNX22Q96L94 193 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 TOX2Q96NM4 488 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 POFUT1Q9H488 388 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SGK2Q9HBY8 427 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SLC52A3Q9NQ40 469 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 EXOSC3Q9NQT5 275 aaKnown RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SLC2A9Q9NRM0 540 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 MRPL22Q9NWU5 206 aaKnown RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 STARD10Q9Y365 291 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 CSAG2Q9Y5P2 127 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ARID1BQ8NFD5 2236 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 A0A1W2PS29 197 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 GALTP07902 379 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 PTGER3P43115 390 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 TAS2R19P59542 299 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ACSM1Q08AH1 577 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ATP6V1FQ16864 119 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 KHDC3LQ587J8 217 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 EXOSC6Q5RKV6 272 aaKnown RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 HENMT1Q5T8I9 393 aaKnown RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ZNF322Q6U7Q0 402 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SYT9Q86SS6 491 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ZNF679Q8IYX0 411 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 CMTM4Q8IZR5 234 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 COMMD1Q8N668 190 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 OR2T33Q8NG76 320 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 OR11G2Q8NGC1 345 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 OR52N2Q8NGI0 321 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 OR13C9Q8NGT0 318 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 PHOSPHO2Q8TCD6 241 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ECHDC3Q96DC8 303 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 APIPQ96GX9 242 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SENP5Q96HI0 755 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 TP53RKQ96S44 253 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 UBL7Q96S82 380 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 NPY6RQ99463 290 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SELENOIQ9C0D9 397 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SLC32A1Q9H598 525 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 FAM124BQ9H5Z6 455 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 TM7SF3Q9NS93 570 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 WBP1LQ9NX94 342 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 GAB2Q9UQC2 676 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 DUXAA6NLW8 204 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 NME2P1O60361 137 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 LRP3O75074 770 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 OR2A4O95047 310 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 MBPP02686 304 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 ELFN1P0C7U0 828 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 F3P13726 295 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 ACKR3P25106 362 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 MPGP29372 298 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 SNCAP37840 140 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 RGS8P57771 180 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 STXBP1P61764 594 aaKnown RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 TMEM115Q12893 351 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 GAB1Q13480 694 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 SSPNQ14714 243 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 PCBP2Q15366 365 aaKnown RBP eCLIP7.03□□□□□ -1.284e-7■■■■□ 25.4
VTI1A-201ENST00000393077 SLC36A2Q495M3 483 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 PRAMEF14Q5SWL7 426 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 SLC35D2Q76EJ3 337 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 ZNF584Q8IVC4 421 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 SLC24A4Q8NFF2 622 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 OR5L2Q8NGL0 311 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 SVIPQ8NHG7 77 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 RAB8BQ92930 207 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 DNAJA3Q96EY1 480 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 ZNF845Q96IR2 970 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 OR2A7Q96R45 310 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 PARD6GQ9BYG4 376 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 MYOZ1Q9NP98 299 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 FOXJ2Q9P0K8 574 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 USP36Q9P275 1121 aaKnown RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 FTSJ1Q9UET6 329 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 GJD2Q9UKL4 321 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 LSM2Q9Y333 95 aaKnown RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 ZNF638Q14966 1978 aaKnown RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 OR2W5A6NFC9 320 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 SMPD2O60906 423 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 KLF8O95600 359 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 FGBP02675 491 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 NPSP0C0P6 89 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 IDSP22304 550 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 ITPKBP27987 946 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 PSMB6P28072 239 aa7.03□□□□□ -1.28
VTI1A-201ENST00000393077 INPP5JQ15735 1006 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-201ENST00000393077 GPRIN1Q7Z2K8 1008 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms