RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 OR5M10Q6IEU7 315 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 SEZ6L2Q6UXD5 910 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 TGIF2LXQ8IUE1 241 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 PXT1Q8NFP0 134 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 OR6C1Q96RD1 312 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 ACTRT3Q9BYD9 372 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 REEP1Q9H902 201 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 RNF122Q9H9V4 155 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 MCRIP1C9JLW8 97 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 J3KTA2 159 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 HEXAP06865 529 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 HCKP08631 526 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 S1PR1P21453 382 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 DUSP5Q16690 384 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 VWA2Q5GFL6 755 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 LGI4Q8N135 537 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 BMPERQ8N8U9 685 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 CDS1Q92903 461 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 NDC1Q9BTX1 674 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 APMAPQ9HDC9 416 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 ENAMQ9NRM1 1142 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 LANCL2Q9NS86 450 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 TXNL4BQ9NX01 149 aaKnown RBP17.32■□□□□ 0.36
CCDC50-202ENST00000392456 NDUFB11Q9NX14 153 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 PTGFRNQ9P2B2 879 aa17.32■□□□□ 0.36
CCDC50-202ENST00000392456 LSM2Q9Y333 95 aaKnown RBP17.32■□□□□ 0.36
CCDC50-202ENST00000392456 OR10H2O60403 315 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 SNAPC5O75971 98 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 ACP2P11117 423 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 NPR2P20594 1047 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 ITGA3P26006 1051 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 HTR5AP47898 357 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 SKP1P63208 163 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 RBM45Q8IUH3 476 aaKnown RBP17.31■□□□□ 0.36
CCDC50-202ENST00000392456 ZNF595Q8IYB9 648 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 PRSS58Q8IYP2 241 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 ADAT1Q9BUB4 502 aaKnown RBP17.31■□□□□ 0.36
CCDC50-202ENST00000392456 SPATA5L1Q9BVQ7 753 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 MRPL37Q9BZE1 423 aaKnown RBP17.31■□□□□ 0.36
CCDC50-202ENST00000392456 TCF7L1Q9HCS4 588 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 OTOGLQ3ZCN5 2332 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 TOX3O15405 576 aaPredicted RBP17.31■□□□□ 0.36
CCDC50-202ENST00000392456 SERPINA3P01011 423 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 AKIRIN2Q53H80 203 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 LAPTM4BQ86VI4 370 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 LSRQ86X29 649 aaPredicted RBP17.31■□□□□ 0.36
CCDC50-202ENST00000392456 ARMC10Q8N2F6 343 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 OR4D11Q8NGI4 311 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 ADAMTS15Q8TE58 950 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 OCIAD1Q9NX40 245 aa17.31■□□□□ 0.36
CCDC50-202ENST00000392456 RALGAPA1Q6GYQ0 2036 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 A0A1B0GW55 424 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 TPST2O60704 377 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 DUX4L2P0CJ85 424 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 DUX4L3P0CJ86 424 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 DUX4L4P0CJ87 422 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 DUX4L5P0CJ88 424 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 DUX4L6P0CJ89 424 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 DUX4L7P0CJ90 424 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 PDX1P52945 283 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 GSG1Q2KHT4 349 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 PHF19Q5T6S3 580 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 MEIOBQ8N635 442 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 THAP6Q8TBB0 222 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 APOBEC4Q8WW27 367 aaKnown RBP17.3■□□□□ 0.36
CCDC50-202ENST00000392456 HDHD2Q9H0R4 259 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 ABCG5Q9H222 651 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 SLC38A1Q9H2H9 487 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 FBXO34Q9NWN3 711 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 DUX4Q9UBX2 424 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 CUL9Q8IWT3 2517 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 EPPINO95925 133 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 ANKRD34CP0C6C1 535 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 NFYAP23511 347 aaPredicted RBP17.3■□□□□ 0.36
CCDC50-202ENST00000392456 IGLV3-21P80748 117 aaPredicted RBP17.3■□□□□ 0.36
CCDC50-202ENST00000392456 PDZK1IP1Q13113 114 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 NTRK2Q16620 822 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 IFI44LQ53G44 452 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 PWWP2BQ6NUJ5 590 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 CDC73Q6P1J9 531 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 MISPQ8IVT2 679 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 SLITRK4Q8IW52 837 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 BEST4Q8NFU0 473 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 OR52R1Q8NGF1 315 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 TSLPQ969D9 159 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 C7orf50Q9BRJ6 194 aaKnown RBP17.3■□□□□ 0.36
CCDC50-202ENST00000392456 GPR61Q9BZJ8 451 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 METTL9Q9H1A3 318 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 DPAGT1Q9H3H5 408 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 TMPRSS5Q9H3S3 457 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 TAS2R3Q9NYW6 316 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 CNOT2Q9NZN8 540 aaKnown RBP17.3■□□□□ 0.36
CCDC50-202ENST00000392456 MRPS33Q9Y291 106 aaKnown RBP17.3■□□□□ 0.36
CCDC50-202ENST00000392456 TP53TG5Q9Y2B4 290 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 KMT2EQ8IZD2 1858 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 KIF26BQ2KJY2 2108 aa17.3■□□□□ 0.36
CCDC50-202ENST00000392456 CELSR3Q9NYQ7 3312 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 SMIM30A4D0T7 59 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 GALR2O43603 387 aaPredicted RBP17.29■□□□□ 0.36
CCDC50-202ENST00000392456 SSNA1O43805 119 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 468.7 ms