RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 BPESC1Q9GZL8 116 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 NPHS2Q9NP85 383 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 B3GNT2Q9NY97 397 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 MRPL39Q9NYK5 338 aaKnown RBP14.34□□□□□ -0.11
PTPRK-208ENST00000392449 ZNF224Q9NZL3 707 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 CORINQ9Y5Q5 1042 aa14.34□□□□□ -0.11
PTPRK-208ENST00000392449 LRP5LA4QPB2 252 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 KPNA4O00629 521 aaPredicted RBP14.33□□□□□ -0.12
PTPRK-208ENST00000392449 LYPD3O95274 346 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 IFNA2P01563 188 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 FAM157CP0CG43 387 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 NPR2P20594 1047 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 ARR3P36575 388 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 PPOXP50336 477 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 SRSF2Q01130 221 aaKnown RBP14.33□□□□□ -0.12
PTPRK-208ENST00000392449 MFSD13AQ14CX5 517 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 ENTPD8Q5MY95 495 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 LRRC17Q8N6Y2 441 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 OR6S1Q8NH40 331 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 CKAP2Q8WWK9 683 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 DOK1Q99704 481 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 TMEM43Q9BTV4 400 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 BEX2Q9BXY8 128 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 ULBP2Q9BZM5 246 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 ZNF442Q9H7R0 627 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 CDC42EP3Q9UKI2 254 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 USP22Q9UPT9 525 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 NDUFAF1Q9Y375 327 aa14.33□□□□□ -0.12
PTPRK-208ENST00000392449 LOC390937A0A1W2PQ73 354 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 ANGPT2O15123 496 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 PHF1O43189 567 aaPredicted RBP14.32□□□□□ -0.12
PTPRK-208ENST00000392449 LMX1BO60663 402 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 PATE4P0C8F1 98 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 ADORA3P0DMS8 318 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 APEHP13798 732 aaKnown RBP14.32□□□□□ -0.12
PTPRK-208ENST00000392449 IFNGR1P15260 489 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 BIDP55957 195 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 NFYCQ13952 458 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 DAG1Q14118 895 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 IQCCQ4KMZ1 466 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 LINC00114Q6XXX2 140 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 DPP10Q8N608 796 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 BHLHE22Q8NFJ8 381 aaPredicted RBP14.32□□□□□ -0.12
PTPRK-208ENST00000392449 OR6N1Q8NGY5 312 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 TAMM41Q96BW9 452 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 ZNF75AQ96N20 296 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 TPK1Q9H3S4 243 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 NOX1Q9Y5S8 564 aa14.32□□□□□ -0.12
PTPRK-208ENST00000392449 LOC100289279A0A1B0GTE1 492 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 ZNF726A6NNF4 738 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 LYNX1G3V0Z9 82 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 NDUFS8O00217 210 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 CHP2O43745 196 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 CH25HO95992 272 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 LYNX1P0DP58 116 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 ZNF14P17017 642 aaPredicted RBP14.31□□□□□ -0.12
PTPRK-208ENST00000392449 CD247P20963 164 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 PAX7P23759 505 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 IL2RGP31785 369 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 PTDSS1P48651 473 aaKnown RBP14.31□□□□□ -0.12
PTPRK-208ENST00000392449 CRYBA2P53672 197 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 MELKQ14680 651 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 GSG1Q2KHT4 349 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 SWT1Q5T5J6 900 aaKnown RBP14.31□□□□□ -0.12
PTPRK-208ENST00000392449 ZNF613Q6PF04 617 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 PXKQ7Z7A4 578 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 OR5J2Q8NH18 312 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 OR10A6Q8NH74 314 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 FGFBP3Q8TAT2 258 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 ADAMTS16Q8TE57 1224 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 MAGEB18Q96M61 343 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 SHARPINQ9H0F6 387 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 RAB1BQ9H0U4 201 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 RABEP2Q9H5N1 569 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 KAT8Q9H7Z6 458 aaKnown RBP14.31□□□□□ -0.12
PTPRK-208ENST00000392449 MOV10Q9HCE1 1003 aaKnown RBP14.31□□□□□ -0.12
PTPRK-208ENST00000392449 SLC7A7Q9UM01 511 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 FZR1Q9UM11 496 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 POFUT2Q9Y2G5 429 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.31□□□□□ -0.123e-9■■□□□ 13.9
PTPRK-208ENST00000392449 A0A0G2JND7 137 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 FBP2O00757 339 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 STAMBPO95630 424 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 ADRA2AP08913 450 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 DAOP14920 347 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 GIPRP48546 466 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 GZMKP49863 264 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 RBBP4Q09028 425 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 SF3A3Q12874 501 aaKnown RBP eCLIP14.31□□□□□ -0.12
PTPRK-208ENST00000392449 ZNF74Q16587 644 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 LRR1Q96L50 414 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 FOXB1Q99853 325 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 MRPL37Q9BZE1 423 aaKnown RBP14.31□□□□□ -0.12
PTPRK-208ENST00000392449 DYNLRB1Q9NP97 96 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 B3GAT2Q9NPZ5 323 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 TMEM160Q9NX00 188 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 TAS2R5Q9NYW4 299 aa14.31□□□□□ -0.12
PTPRK-208ENST00000392449 HMGB1P1B2RPK0 211 aaPredicted RBP14.3□□□□□ -0.12
PTPRK-208ENST00000392449 FMO6PO60774 539 aa14.3□□□□□ -0.12
PTPRK-208ENST00000392449 EDF1O60869 148 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms