RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ADIPOR2Q86V24 386 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 DND1Q8IYX4 353 aaKnown RBP13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 SDR9C7Q8NEX9 313 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 CCDC107Q8WV48 283 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 SLC39A7Q92504 469 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 IRF7Q92985 503 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 CPNE2Q96FN4 548 aaPredicted RBP13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 MAP3K3Q99759 626 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 GGACTQ9BVM4 153 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 TMPRSS5Q9H3S3 457 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 MEPEQ9NQ76 525 aaPredicted RBP13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 ZNF223Q9UK11 482 aaPredicted RBP13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 ETV7Q9Y603 341 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 XRCC3O43542 346 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 VEGFDO43915 354 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 LEFTY1O75610 366 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 METAP1P53582 386 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 ATP1B3P54709 279 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 TGM3Q08188 693 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 ZNF234Q14588 700 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 MST1LQ2TV78 715 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 ANKRD39Q53RE8 183 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 IL34Q6ZMJ4 242 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 ABHD13Q7L211 337 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 FAM129CQ86XR2 697 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 STOML3Q8TAV4 291 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 KRCC1Q9NPI7 259 aaPredicted RBP13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 POLE3Q9NRF9 147 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 DZANK1Q9NVP4 752 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 KLHL28Q9NXS3 571 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 NCDNQ9UBB6 729 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 YBX2Q9Y2T7 364 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 A0A1B0GV90 55 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 PPIHO43447 177 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 GPRIN2O60269 458 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 POP4O95707 220 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 CD74P04233 296 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 MELTFP08582 738 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 NQO2P16083 231 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 PSMB10P40306 273 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 HTR5AP47898 357 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 CSNK1EP49674 416 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 NCBP2P52298 156 aaKnown RBP eCLIP13.39□□□□□ -0.276e-6■■□□□ 11.7
VPS9D1-201ENST00000389386 TCEAL5Q5H9L2 206 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 MRM1Q6IN84 353 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 OR9A1PQ8NGU1 263 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 RNF141Q8WVD5 230 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 PPP1R1CQ8WVI7 109 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 SEC22AQ96IW7 307 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 MS4A8Q9BY19 250 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 MTIF3Q9H2K0 278 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 C20orf141Q9NUB4 165 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 ATG2BQ96BY7 2078 aa13.39□□□□□ -0.27
VPS9D1-201ENST00000389386 RIIAD1A6NNX1 92 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 RHPN2P1A8MT19 583 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 MT-ND4LP03901 98 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 CD3DP04234 171 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 HOXC4P09017 264 aaPredicted RBP13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 CERS1P27544 350 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 PBLDP30039 288 aaPredicted RBP13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 F2RL1P55085 397 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 TAS2R38P59533 333 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 ACTA2P62736 377 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 ACTG2P63267 376 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 GUCA2AQ02747 115 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 HGFACQ04756 655 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 GDPD4Q6W3E5 623 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 SLC29A4Q7RTT9 530 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 DMRTC2Q8IXT2 367 aaPredicted RBP13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 PIK3IP1Q96FE7 263 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 LRRC3BQ96PB8 259 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 PRSS27Q9BQR3 290 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 SEC61A2Q9H9S3 476 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 SPHK2Q9NRA0 654 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 GNG8Q9UK08 70 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 C17orf113A0A1B0GUU1 675 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 A0A1B0GWJ7 208 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 CPED1A4D0V7 1026 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 F8VVB4 439 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 F8VWA3 439 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 CTSLP07711 333 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 FAM157CP0CG43 387 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 ZNF14P17017 642 aaPredicted RBP13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 POU3F4P49335 361 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 POU4F2Q12837 409 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 KLHL26Q53HC5 615 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 NKAPLQ5M9Q1 402 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 YOD1Q5VVQ6 348 aaPredicted RBP13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 OR52W1Q6IF63 320 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 LPCAT3Q6P1A2 487 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 ETV3LQ6ZN32 361 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 AMER3Q8N944 861 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 SLC30A7Q8NEW0 376 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 DVL3Q92997 716 aaPredicted RBP13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 RSRP1Q9BUV0 290 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 LAT2Q9GZY6 243 aa13.38□□□□□ -0.27
VPS9D1-201ENST00000389386 ARGFXA6NJG6 315 aa13.37□□□□□ -0.27
VPS9D1-201ENST00000389386 RCBTB2O95199 551 aa13.37□□□□□ -0.27
VPS9D1-201ENST00000389386 ZIC2O95409 532 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-201ENST00000389386 HSD17B7P56937 341 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms