RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 LINC00303Q3SY05 128 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 TMEM69Q5SWH9 247 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 OR5M10Q6IEU7 315 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 LRFN4Q6PJG9 635 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 IZUMO1Q8IYV9 350 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 DNAAF1Q8NEP3 725 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 OR6K3Q8NGY3 331 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 SLC25A38Q96DW6 304 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 PELI1Q96FA3 418 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 ZNF285Q96NJ3 590 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 DUSP15Q9H1R2 295 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-202ENST00000381990 EVA1AQ9H8M9 152 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 MED31Q9Y3C7 131 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 SIT1Q9Y3P8 196 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 BCAT2O15382 392 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-202ENST00000381990 SELENOFO60613 162 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 DCNP07585 359 aaKnown RBP8.16□□□□□ -1.1
GPNMB-202ENST00000381990 RPA2P15927 270 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 DPP4P27487 766 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 NOS3P29474 1203 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 PTH2RP49190 550 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 AFF3P51826 1226 aaKnown RBP8.16□□□□□ -1.1
GPNMB-202ENST00000381990 SCAND1P57086 179 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 COL9A2Q14055 689 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-202ENST00000381990 CRMP1Q14194 572 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 ETFDHQ16134 617 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 TRMT12Q53H54 448 aaKnown RBP8.16□□□□□ -1.1
GPNMB-202ENST00000381990 SHEQ5VZ18 495 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 MTFR2Q6P444 385 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 DNM1P46Q6ZS02 220 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 SMAP2Q8WU79 429 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-202ENST00000381990 PIGKQ92643 395 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 CDS1Q92903 461 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 ANKRD9Q96BM1 317 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-202ENST00000381990 HAVCR1Q96D42 359 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 DERL3Q96Q80 235 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 OR14A2Q96R54 314 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 CNN2Q99439 309 aaKnown RBP8.16□□□□□ -1.1
GPNMB-202ENST00000381990 CHRNA10Q9GZZ6 450 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 RAB33BQ9H082 229 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 C20orf141Q9NUB4 165 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 TAS2R8Q9NYW2 309 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 MRPL15Q9P015 296 aaKnown RBP8.16□□□□□ -1.1
GPNMB-202ENST00000381990 KLK11Q9UBX7 282 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 EPHA6Q9UF33 1036 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 ATPIF1Q9UII2 106 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 PLCL2Q9UPR0 1127 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 PCDHGA5Q9Y5G8 931 aa8.16□□□□□ -1.1
GPNMB-202ENST00000381990 TP53BP1Q12888 1972 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-202ENST00000381990 SPTBP11277 2137 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 HPP00738 406 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 DBIP07108 87 aaKnown RBP8.15□□□□□ -1.1
GPNMB-202ENST00000381990 ADRB1P08588 477 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 RNH1P13489 461 aaKnown RBP8.15□□□□□ -1.1
GPNMB-202ENST00000381990 GABRA4P48169 554 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 PPM1FP49593 454 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-202ENST00000381990 STX4Q12846 297 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 FAM53BQ14153 422 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 OR1Q1Q15612 314 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 DUSP5Q16690 384 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 PRICKLE4Q2TBC4 344 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 EXOSC6Q5RKV6 272 aaKnown RBP8.15□□□□□ -1.1
GPNMB-202ENST00000381990 SFRP5Q5T4F7 317 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 ZCCHC12Q6PEW1 402 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 THSD4Q6ZMP0 1018 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 SHISA5Q8N114 240 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 STPG2Q8N412 459 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 PFN4Q8NHR9 129 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 SNX33Q8WV41 574 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 PMM1Q92871 262 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 TGM7Q96PF1 710 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 IER2Q9BTL4 223 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 ENKD1Q9H0I2 346 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 ADAP2Q9NPF8 381 aa8.15□□□□□ -1.1
GPNMB-202ENST00000381990 A0A0A6YYC8 382 aaPredicted RBP8.15□□□□□ -1.11
GPNMB-202ENST00000381990 A0A1W2PPK0 400 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 BLACEA4D250 179 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 C19orf67A6NJJ6 358 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 RHPN2P1A8MT19 583 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 F5H5P2 479 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 I3L1I5 382 aaPredicted RBP8.15□□□□□ -1.11
GPNMB-202ENST00000381990 PTP4A3O75365 173 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 SLC35E2P0CK97 266 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 NID1P14543 1247 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 ANXA7P20073 488 aaKnown RBP8.15□□□□□ -1.11
GPNMB-202ENST00000381990 POU3F2P20265 443 aaPredicted RBP8.15□□□□□ -1.11
GPNMB-202ENST00000381990 RPS4Y1P22090 263 aaKnown RBP8.15□□□□□ -1.11
GPNMB-202ENST00000381990 SLC6A6P31641 620 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 P2RX1P51575 399 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 GFERP55789 205 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 MGAT2Q10469 447 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 NDUFAF6Q330K2 333 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 AMZ1Q400G9 498 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 ZNF613Q6PF04 617 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 WDR88Q6ZMY6 472 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 SSX6Q7RTT6 188 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 SYT9Q86SS6 491 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 CDRT4Q8N9R6 151 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 OR13C2Q8NGS9 318 aa8.15□□□□□ -1.11
GPNMB-202ENST00000381990 RPS4Y2Q8TD47 263 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms