RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 FAM90A27PA6NNH2 459 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 EEF1E1-BLOC1S5C9J1V9 151 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 EEF1E1O43324 174 aaKnown RBP13.67□□□□□ -0.22
PDGFB-202ENST00000381551 AKAP8O43823 692 aaKnown RBP13.67□□□□□ -0.22
PDGFB-202ENST00000381551 CNOT4O95628 575 aaKnown RBP13.67□□□□□ -0.22
PDGFB-202ENST00000381551 SLC6A6P31641 620 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 DAP3P51398 398 aaKnown RBP13.67□□□□□ -0.22
PDGFB-202ENST00000381551 RPL27P61353 136 aaKnown RBP13.67□□□□□ -0.22
PDGFB-202ENST00000381551 RUNX1T1Q06455 604 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 CAMK2DQ13557 499 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 FBXL19-AS1Q494R0 122 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 TSPO2Q5TGU0 170 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 FBXW9Q5XUX1 488 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 KDM4DQ6B0I6 523 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 FAM122BQ7Z309 247 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 C20orf196Q8IYI0 205 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 GABRG1Q8N1C3 465 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 FANK1Q8TC84 345 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 ASB10Q8WXI3 467 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 SLC25A44Q96H78 314 aaPredicted RBP13.67□□□□□ -0.22
PDGFB-202ENST00000381551 LRR1Q96L50 414 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 TSPAN32Q96QS1 320 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 OSBPL10Q9BXB5 764 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 PLA2G12AQ9BZM1 189 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 NDEL1Q9GZM8 345 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 SLC7A10Q9NS82 523 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 ADAM18Q9Y3Q7 739 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 IER3IP1Q9Y5U9 82 aa13.67□□□□□ -0.22
PDGFB-202ENST00000381551 OR6C65A6NJZ3 312 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 H0YHG0 523 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 ARPC3O15145 178 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 SLC43A1O75387 559 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 UPK3AO75631 287 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 IGHV3-9P01782 118 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 OSMP13725 252 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 APEHP13798 732 aaKnown RBP13.66□□□□□ -0.22
PDGFB-202ENST00000381551 ACADSP16219 412 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 ASCL1P50553 236 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 PPP2R2BQ00005 443 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 TFF3Q07654 80 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 LGALS3BPQ08380 585 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 MELKQ14680 651 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 Q6ZT83 130 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 BEND4Q6ZU67 534 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 ARIH2OSQ8N7S6 290 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 POMGNT2Q8NAT1 580 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 OR8D4Q8NGM9 314 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 DNAJC9Q8WXX5 260 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 Q96M85 177 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 CIB1Q99828 191 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 IFT27Q9BW83 186 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 POLDIP3Q9BY77 421 aaKnown RBP13.66□□□□□ -0.22
PDGFB-202ENST00000381551 MRPL13Q9BYD1 178 aaKnown RBP13.66□□□□□ -0.22
PDGFB-202ENST00000381551 LINC00470Q9BZP3 86 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 SLCO5A1Q9H2Y9 848 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 PAPOLBQ9NRJ5 636 aaKnown RBP13.66□□□□□ -0.22
PDGFB-202ENST00000381551 ELOVL5Q9NYP7 299 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 STX18Q9P2W9 335 aaKnown RBP13.66□□□□□ -0.22
PDGFB-202ENST00000381551 GRHPRQ9UBQ7 328 aa13.66□□□□□ -0.22
PDGFB-202ENST00000381551 TMEFF2Q9UIK5 374 aaPredicted RBP13.66□□□□□ -0.22
PDGFB-202ENST00000381551 IMPA2O14732 288 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 SOX14O95416 240 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 PPP1R3DO95685 299 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 TXNDC12O95881 172 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 ACVR1BP36896 505 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 PCYT1AP49585 367 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 TOP3AQ13472 1001 aaPredicted RBP13.65□□□□□ -0.22
PDGFB-202ENST00000381551 SLC36A3Q495N2 470 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 CLEC12AQ5QGZ9 265 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 PHYHD1Q5SRE7 291 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 CARD17Q5XLA6 110 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 GPR139Q6DWJ6 353 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 PARP8Q8N3A8 854 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 CBR4Q8N4T8 237 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 ZNF519Q8TB69 540 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 TMEM54Q969K7 222 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 ZNF566Q969W8 418 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 ERMAPQ96PL5 475 aaPredicted RBP13.65□□□□□ -0.22
PDGFB-202ENST00000381551 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 RBM4BQ9BQ04 359 aaKnown RBP13.65□□□□□ -0.22
PDGFB-202ENST00000381551 C9orf16Q9BUW7 83 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 RBM4Q9BWF3 364 aaKnown RBP13.65□□□□□ -0.22
PDGFB-202ENST00000381551 RBM24Q9BX46 236 aaKnown RBP13.65□□□□□ -0.22
PDGFB-202ENST00000381551 TSSK6Q9BXA6 273 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 KIF17Q9P2E2 1029 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 UPB1Q9UBR1 384 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 FOXD3Q9UJU5 478 aaPredicted RBP13.65□□□□□ -0.22
PDGFB-202ENST00000381551 POFUT2Q9Y2G5 429 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 SPTBN1Q01082 2364 aaKnown RBP13.65□□□□□ -0.22
PDGFB-202ENST00000381551 DOPEY1Q5JWR5 2465 aa13.65□□□□□ -0.22
PDGFB-202ENST00000381551 A6NIZ1 184 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 CENPBD1B2RD01 187 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 H3BN98 237 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 BHLHE40O14503 412 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 IDH3BO43837 385 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 MGRN1O60291 552 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 MITFO75030 526 aaPredicted RBP13.64□□□□□ -0.23
PDGFB-202ENST00000381551 TRMUO75648 421 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms