RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 CORINQ9Y5Q5 1042 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 GPR45Q9Y5Y3 372 aa13.76□□□□□ -0.21
VCX3A-201ENST00000381089 A0A1W2PPW3 197 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 C5orf58C9J3I9 102 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 FAM157AC9JC47 383 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 SDHDO14521 159 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 HDAC3O15379 428 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 WIPF1O43516 503 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 TRAF3IP2O43734 574 aaPredicted RBP13.75□□□□□ -0.21
VCX3A-201ENST00000381089 EDF1O60869 148 aaKnown RBP13.75□□□□□ -0.21
VCX3A-201ENST00000381089 FZD7O75084 574 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 SLC22A3O75751 556 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 HPXP02790 462 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 GAAP10253 952 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF35P13682 527 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 TCN1P20061 433 aaPredicted RBP13.75□□□□□ -0.21
VCX3A-201ENST00000381089 ALDH3B1P43353 468 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 PTDSS1P48651 473 aaKnown RBP13.75□□□□□ -0.21
VCX3A-201ENST00000381089 MVDP53602 400 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 SELENOVP59797 346 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 PIGFQ07326 219 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 FAHD2BQ6P2I3 314 aaPredicted RBP13.75□□□□□ -0.21
VCX3A-201ENST00000381089 MSANTD1Q6ZTZ1 278 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 USP43Q70EL4 1123 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 C20orf196Q8IYI0 205 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 BBS10Q8TAM1 723 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 FAM216AQ8WUB2 273 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 TAAR8Q969N4 342 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 FAHD2AQ96GK7 314 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 EPYCQ99645 322 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 ASPNQ9BXN1 380 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF385DQ9H6B1 395 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 WDR55Q9H6Y2 383 aaPredicted RBP13.75□□□□□ -0.21
VCX3A-201ENST00000381089 FGFR1OP2Q9NVK5 253 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 FAM53CQ9NYF3 392 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 USH1CQ9Y6N9 552 aa13.75□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF726A6NNF4 738 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 ENTPD5O75356 428 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 UBL3O95164 117 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 PNPP00491 289 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF14P17017 642 aaPredicted RBP13.74□□□□□ -0.21
VCX3A-201ENST00000381089 COL8A2P25067 703 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 LIMS1P48059 325 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 HILS1P60008 231 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 NCALDP61601 193 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 GNGT1P63211 74 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 HOXC5Q00444 222 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 MYBPC1Q00872 1141 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 GLIPR1L2Q4G1C9 344 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 ALG10BQ5I7T1 473 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 C6orf10Q5SRN2 563 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 NXNQ6DKJ4 435 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 LSMEM1Q8N8F7 131 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 OR6N1Q8NGY5 312 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 MS4A3Q96HJ5 214 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 ULBP2Q9BZM5 246 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 RACGAP1Q9H0H5 632 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 CCDC134Q9H6E4 229 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 BCL2L10Q9HD36 194 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 NPHS2Q9NP85 383 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF275Q9NSD4 429 aaPredicted RBP13.74□□□□□ -0.21
VCX3A-201ENST00000381089 SLC6A13Q9NSD5 602 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 TREM2Q9NZC2 230 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 SLC7A8Q9UHI5 535 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 DUSP13Q9UII6 198 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 CHST2Q9Y4C5 530 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 TENM1Q9UKZ4 2725 aa13.74□□□□□ -0.21
VCX3A-201ENST00000381089 TMEM89A2RUT3 159 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 B4GALT1P15291 398 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 EPHA1P21709 976 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 CBLP22681 906 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 EPHA3P29320 983 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 GIPRP48546 466 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 AQP5P55064 265 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 RAB1AP62820 205 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 FADDQ13158 208 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 CAMK2DQ13557 499 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 NKPD1Q17RQ9 610 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 MMEL1Q495T6 779 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 ULK3Q6PHR2 472 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 THSD4Q6ZMP0 1018 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 ZNF627Q7L945 461 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 PEG10Q86TG7 708 aaKnown RBP13.73□□□□□ -0.21
VCX3A-201ENST00000381089 SCAIQ8N9R8 606 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 OR6S1Q8NH40 331 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 RNF217Q8TC41 542 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 SLC47A1Q96FL8 570 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 FOXB1Q99853 325 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 SPATA5L1Q9BVQ7 753 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 SUCNR1Q9BXA5 334 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 A4GALTQ9NPC4 353 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 SLC52A3Q9NQ40 469 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 KLHL14Q9P2G3 628 aa13.73□□□□□ -0.21
VCX3A-201ENST00000381089 A0A087WUJ7 227 aa13.72□□□□□ -0.21
VCX3A-201ENST00000381089 A0A1B0GWA3 101 aa13.72□□□□□ -0.21
VCX3A-201ENST00000381089 SLC22A23A1A5C7 686 aa13.72□□□□□ -0.21
VCX3A-201ENST00000381089 RGS9O75916 674 aaPredicted RBP13.72□□□□□ -0.21
VCX3A-201ENST00000381089 ETS2P15036 469 aa13.72□□□□□ -0.21
VCX3A-201ENST00000381089 PRKAR1BP31321 381 aa13.72□□□□□ -0.21
VCX3A-201ENST00000381089 SEC24CP53992 1094 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms