RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 IFITM3Q01628 133 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 HSF2Q03933 536 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 ZP4Q12836 540 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 TRIP6Q15654 476 aaKnown RBP17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 ZNF468Q5VIY5 522 aaPredicted RBP17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 TUBA3EQ6PEY2 450 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 PLCZ1Q86YW0 608 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 DND1Q8IYX4 353 aaKnown RBP17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 ESX1Q8N693 406 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 NLGN4YQ8NFZ3 816 aaPredicted RBP17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 PGLYRP3Q96LB9 341 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 P4HTMQ9NXG6 502 aa17.86■□□□□ 0.45
PDLIM5-205ENST00000380180 CASKO14936 926 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 OGG1O15527 345 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 RGS5O15539 181 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 GPANK1O95872 356 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 CD40LGP29965 261 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 GBX2P52951 348 aaPredicted RBP17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 CAV3P56539 151 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 SIRPAP78324 504 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 ZNF45Q02386 682 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 TLE3Q04726 772 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 CHAF1BQ13112 559 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 MYBPHQ13203 477 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 MELKQ14680 651 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 PARP16Q8N5Y8 322 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 MRPL48Q96GC5 212 aaKnown RBP17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 TMEM185BQ9H7F4 350 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 PARD6AQ9NPB6 346 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 CHST11Q9NPF2 352 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 B9D1Q9UPM9 204 aa17.85■□□□□ 0.45
PDLIM5-205ENST00000380180 IQCMA0A1B0GVH7 501 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 PRR32B1ATL7 298 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 PSMD9O00233 223 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 C19orf57Q0VDD7 668 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 DNASE1L3Q13609 305 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 C3orf33Q6P1S2 294 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 CCDC190Q86UF4 302 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 ABHD4Q8TB40 342 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 GHSRQ92847 366 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 ADAD1Q96M93 576 aaKnown RBP17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 SNX18Q96RF0 628 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 KCNN2Q9H2S1 579 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 MARCH7Q9H992 704 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 ACOXLQ9NUZ1 547 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 VSX1Q9NZR4 365 aaPredicted RBP17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 FKBP7Q9Y680 259 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 AKR7A3O95154 331 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 ZNF12P17014 697 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 TNFSF8P32971 234 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 DLSTP36957 453 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 NUBP1P53384 320 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 TRAM1Q15629 374 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 CSRP2Q16527 193 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 B3GNTL1Q67FW5 361 aaPredicted RBP17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 CDC20BQ86Y33 519 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 NTNG2Q96CW9 530 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 GNRHR2Q96P88 292 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 WDR76Q9H967 626 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 ALKBH4Q9NXW9 302 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 KLHDC2Q9Y2U9 406 aa17.84■□□□□ 0.45
PDLIM5-205ENST00000380180 EP300Q09472 2414 aaPredicted RBP17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 NCKAP5O14513 1909 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 SLC22A23A1A5C7 686 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 G3V3Y1 287 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 SULT1C4O75897 302 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 ADH6P28332 368 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 PSMB10P40306 273 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 ETV6P41212 452 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 EIF1P41567 113 aaKnown RBP17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 CDK5R1Q15078 307 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 ZNF684Q5T5D7 378 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 H3F3CQ6NXT2 135 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 MDGA2Q7Z553 956 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 CEP19Q96LK0 163 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 C5orf34Q96MH7 638 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 PPIL3Q9H2H8 161 aaKnown RBP17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 ANKRD10Q9NXR5 420 aa17.83■□□□□ 0.45
PDLIM5-205ENST00000380180 SLC16A7O60669 478 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 IFNGR1P15260 489 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 SPANXN2Q5MJ10 180 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 RPL22L1Q6P5R6 122 aaKnown RBP17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 PLEKHG7Q6ZR37 379 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 PIP4P1Q86T03 277 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 OR6N2Q8NGY6 317 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 ZBTB8AQ96BR9 441 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 SMIM19Q96E16 107 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 UBL7Q96S82 380 aaPredicted RBP17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 GPR87Q9BY21 358 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 B3GALT5Q9Y2C3 310 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 RPH3AQ9Y2J0 694 aaPredicted RBP17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 SNPHO15079 494 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 SC5DO75845 299 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 TNFSF15O95150 251 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 SERPINA7P05543 415 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 POU3F1Q03052 451 aaPredicted RBP17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 ETFDHQ16134 617 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 RGS21Q2M5E4 152 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 CCDC58Q4VC31 144 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 DPY19L4Q7Z388 723 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms