RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SPANXN2Q5MJ10 180 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 SLC22A16Q86VW1 577 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 LAX1Q8IWV1 398 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 DUSP19Q8WTR2 217 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 PTP4A1Q93096 173 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 SLC22A4Q9H015 551 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 MKKSQ9NPJ1 570 aaPredicted RBP9.85□□□□□ -0.83
NEDD9-201ENST00000379433 LANCL2Q9NS86 450 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 NTMQ9P121 344 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 ING1Q9UK53 422 aaPredicted RBP9.85□□□□□ -0.83
NEDD9-201ENST00000379433 SIGLEC7Q9Y286 467 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 SLC6A5Q9Y345 797 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 PRELID3BQ9Y3B1 194 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 PCDHGA9Q9Y5G4 932 aaKnown RBP9.85□□□□□ -0.83
NEDD9-201ENST00000379433 A0A0B4J2E0 115 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 A0A1B0GX12 115 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 TRIM3O75382 744 aaPredicted RBP9.85□□□□□ -0.83
NEDD9-201ENST00000379433 SCG5P05408 212 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 PSMB10P40306 273 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 MAGEB1P43366 347 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 RNASE12Q5GAN4 147 aaKnown RBP9.85□□□□□ -0.83
NEDD9-201ENST00000379433 FAM69AQ5T7M9 428 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 ARHGEF39Q8N4T4 335 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 LINC00471Q8N535 108 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 PPP1R35Q8TAP8 253 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 TTC9Q92623 222 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 KATNB1Q9BVA0 655 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 PAPOLGQ9BWT3 736 aaKnown RBP9.85□□□□□ -0.83
NEDD9-201ENST00000379433 OR11A1Q9GZK7 315 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 TMEM131Q92545 1883 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 E9PI62 339 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 LOC110117498-PIK3R3F6TDL0 507 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 RCBTB2O95199 551 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 INHBBP09529 407 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 TBXA2RP21731 343 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 SDHBP21912 280 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 PTAFRP25105 342 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 PRRX1P54821 245 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 OR12D2P58182 307 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 SHBQ15464 509 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 MEDAGQ5VYS4 303 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 TMEM108Q6UXF1 575 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 IL20RBQ6UXL0 311 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 S100A7AQ86SG5 101 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 MARCH9Q86YJ5 346 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 MCEMP1Q8IX19 187 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF615Q8N8J6 731 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 POGLUT1Q8NBL1 392 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 OR5M1Q8NGP8 315 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 C9orf43Q8TAL5 461 aaPredicted RBP9.84□□□□□ -0.83
NEDD9-201ENST00000379433 UFD1Q92890 307 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 OCIAD1Q9NX40 245 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 TESQ9UGI8 421 aaKnown RBP9.84□□□□□ -0.83
NEDD9-201ENST00000379433 NPFFR2Q9Y5X5 522 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 A0A1B0GX78 115 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 XKRY2A2RUG3 117 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 TVP23AA6NH52 213 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 IDSB3KWA1 339 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 C22orf46C9J442 243 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 G3V3Y1 287 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 SPDEFO95238 335 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 IL1AP01583 271 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 HLA-DQA2P01906 255 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 TACR3P29371 465 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 HOXA1P49639 335 aaPredicted RBP9.84□□□□□ -0.83
NEDD9-201ENST00000379433 GPR176Q14439 515 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 TIMM50Q3ZCQ8 353 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 ULK3Q6PHR2 472 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 C9orf40Q8IXQ3 194 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF511Q8NB15 262 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 PROKR2Q8NFJ6 384 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 EDAQ92838 391 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 SPACA9Q96E40 222 aaPredicted RBP9.84□□□□□ -0.83
NEDD9-201ENST00000379433 Q96M85 177 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 ALG8Q9BVK2 526 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 NANSQ9NR45 359 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 TXNL4BQ9NX01 149 aaKnown RBP9.84□□□□□ -0.83
NEDD9-201ENST00000379433 PRODH2Q9UF12 536 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 OSGIN1Q9UJX0 560 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 RALGAPA1Q6GYQ0 2036 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 ANKRD61A6NGH8 418 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 H3BML4 177 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 TFECO14948 347 aaPredicted RBP9.84□□□□□ -0.83
NEDD9-201ENST00000379433 CHP2O43745 196 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 RAD1O60671 282 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 F10P00742 488 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF806P0C7X5 589 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 PEPDP12955 493 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 DRD5P21918 477 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 FABP5Q01469 135 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 SELENBP1Q13228 472 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 IRF3Q14653 427 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 LCN10Q6JVE6 187 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 VHLLQ6RSH7 139 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 SLC29A4Q7RTT9 530 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 GRPEL2Q8TAA5 225 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF596Q8TC21 504 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 GPR119Q8TDV5 335 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 KTI12Q96EK9 354 aaPredicted RBP9.84□□□□□ -0.83
NEDD9-201ENST00000379433 UBQLN4Q9NRR5 601 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms