RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 OMPP47874 163 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 ADARB1P78563 741 aaKnown RBP12.17□□□□□ -0.46
PRPF18-202ENST00000378572 PRKCDQ05655 676 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 TAF11Q15544 211 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 TSC22D1Q15714 1073 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 ZNF239Q16600 458 aaKnown RBP12.17□□□□□ -0.46
PRPF18-202ENST00000378572 SLC36A3Q495N2 470 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 TTC23Q5W5X9 447 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 TTC33Q6PID6 262 aaPredicted RBP12.17□□□□□ -0.46
PRPF18-202ENST00000378572 NRMQ8IXM6 262 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 POC1BQ8TC44 478 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 GNPDA2Q8TDQ7 276 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 CPNE4Q96A23 557 aaPredicted RBP12.17□□□□□ -0.46
PRPF18-202ENST00000378572 KLHDC3Q9BQ90 382 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 TOR3AQ9H497 397 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 LRCH1Q9Y2L9 728 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 ELOA3DA6NLF2 546 aaPredicted RBP12.17□□□□□ -0.46
PRPF18-202ENST00000378572 INAFM1C9JVW0 142 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 E9PQ18 207 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 SLC16A6O15403 523 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 NTN1O95631 604 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 PRKCAP17252 672 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 FPR3P25089 353 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 ELK4P28324 431 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 SHC1P29353 583 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 TACR3P29371 465 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 CAPGP40121 348 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 GSSP48637 474 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 POLR2HP52434 150 aaKnown RBP12.17□□□□□ -0.46
PRPF18-202ENST00000378572 MAP2K6P52564 334 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 RPS4XP62701 263 aaKnown RBP12.17□□□□□ -0.46
PRPF18-202ENST00000378572 TSPAN31Q12999 210 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 RNPS1Q15287 305 aaKnown RBP12.17□□□□□ -0.46
PRPF18-202ENST00000378572 TOMM34Q15785 309 aaPredicted RBP12.17□□□□□ -0.46
PRPF18-202ENST00000378572 ELOA3BQ3SY89 546 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 TMPRSS11FQ6ZWK6 438 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 ELOA3Q8NG57 546 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 GTPBP3Q969Y2 492 aaKnown RBP12.17□□□□□ -0.46
PRPF18-202ENST00000378572 ZNF524Q96C55 264 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 MBOAT4Q96T53 435 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 OSGIN1Q9UJX0 560 aa12.17□□□□□ -0.46
PRPF18-202ENST00000378572 FN1P02751 2386 aaKnown RBP12.16□□□□□ -0.46
PRPF18-202ENST00000378572 RAI1Q7Z5J4 1906 aaPredicted RBP12.16□□□□□ -0.46
PRPF18-202ENST00000378572 MITFO75030 526 aaPredicted RBP12.16□□□□□ -0.46
PRPF18-202ENST00000378572 PSMB1P20618 241 aaKnown RBP12.16□□□□□ -0.46
PRPF18-202ENST00000378572 ADH6P28332 368 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 RPS6KA3P51812 740 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 ESRRGP62508 458 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 LSM11P83369 360 aaKnown RBP eCLIP12.16□□□□□ -0.46
PRPF18-202ENST00000378572 TMEM176BQ3YBM2 270 aaPredicted RBP12.16□□□□□ -0.46
PRPF18-202ENST00000378572 KLHL17Q6TDP4 642 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 FCRLAQ7L513 359 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 TUSC5Q8IXB3 177 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 RNF217Q8TC41 542 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 RNF128Q8TEB7 428 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 KISS1RQ969F8 398 aaPredicted RBP12.16□□□□□ -0.46
PRPF18-202ENST00000378572 MRGPRX4Q96LA9 322 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 SRXN1Q9BYN0 137 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 ANKRD60Q9BZ19 345 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 GRIP2Q9C0E4 1043 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 NGBQ9NPG2 151 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 MEPEQ9NQ76 525 aaPredicted RBP12.16□□□□□ -0.46
PRPF18-202ENST00000378572 FAM118AQ9NWS6 357 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 KLHL13Q9P2N7 655 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 RNF115Q9Y4L5 304 aa12.16□□□□□ -0.46
PRPF18-202ENST00000378572 ROS1P08922 2347 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 IGHV3-15A0A0B4J1V0 119 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 PIP5K1CO60331 668 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 CD3EP07766 207 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 OSMP13725 252 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 CXCR1P25024 350 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 APOBEC1P41238 236 aaKnown RBP12.15□□□□□ -0.46
PRPF18-202ENST00000378572 NPRL3Q12980 569 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 IL18R1Q13478 541 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 STK11Q15831 433 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 ZIK1Q3SY52 487 aaPredicted RBP12.15□□□□□ -0.46
PRPF18-202ENST00000378572 C6orf52Q5T4I8 152 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 C5orf46Q6UWT4 87 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 RASSF6Q6ZTQ3 369 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 USP51Q70EK9 711 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 NUFIP2Q7Z417 695 aaKnown RBP12.15□□□□□ -0.46
PRPF18-202ENST00000378572 GALNT5Q7Z7M9 940 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 CDK20Q8IZL9 346 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 ZNF611Q8N823 705 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 ZNF555Q8NEP9 628 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 FAM46AQ96IP4 442 aaKnown RBP12.15□□□□□ -0.46
PRPF18-202ENST00000378572 ESRP2Q9H6T0 727 aaKnown RBP12.15□□□□□ -0.46
PRPF18-202ENST00000378572 REV1Q9UBZ9 1251 aa12.15□□□□□ -0.46
PRPF18-202ENST00000378572 JMJD1CQ15652 2540 aa12.14□□□□□ -0.47
PRPF18-202ENST00000378572 TLN2Q9Y4G6 2542 aa12.14□□□□□ -0.47
PRPF18-202ENST00000378572 HIVEP2P31629 2446 aa12.14□□□□□ -0.47
PRPF18-202ENST00000378572 IGKV1D-42A0A075B6H8 117 aa12.14□□□□□ -0.47
PRPF18-202ENST00000378572 IFI30P13284 250 aa12.14□□□□□ -0.47
PRPF18-202ENST00000378572 IL1RL1Q01638 556 aa12.14□□□□□ -0.47
PRPF18-202ENST00000378572 MED21Q13503 144 aa12.14□□□□□ -0.47
PRPF18-202ENST00000378572 TFAP2EQ6VUC0 442 aa12.14□□□□□ -0.47
PRPF18-202ENST00000378572 CLDN22Q8N7P3 220 aa12.14□□□□□ -0.47
PRPF18-202ENST00000378572 CYGBQ8WWM9 190 aa12.14□□□□□ -0.47
PRPF18-202ENST00000378572 FBXW5Q969U6 566 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms