RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CEP78Q5JTW2 689 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 EEF1A1P5Q5VTE0 462 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 MISPQ8IVT2 679 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 OR5H6Q8NGV6 325 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 CEP76Q8TAP6 659 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 RPS4Y2Q8TD47 263 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 HSD17B8Q92506 261 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 PHYHIPQ92561 330 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 RFT1Q96AA3 541 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 CCDC74BQ96LY2 380 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 THAP7Q9BT49 309 aaPredicted RBP18.29■□□□□ 0.52
VSX1-202ENST00000376709 OR11A1Q9GZK7 315 aa18.29■□□□□ 0.52
VSX1-202ENST00000376709 MRM2Q9UI43 246 aaKnown RBP18.29■□□□□ 0.52
VSX1-202ENST00000376709 A0A0B4J203 849 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 NPIPB7O75200 414 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 TBRG1Q3YBR2 411 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 LIPNQ5VXI9 398 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 PAPD4Q6PIY7 484 aaKnown RBP18.28■□□□□ 0.52
VSX1-202ENST00000376709 UNQ9370/PRO34162Q6UXP9 181 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 DPY19L4Q7Z388 723 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 NFAM1Q8NET5 270 aaPredicted RBP18.28■□□□□ 0.52
VSX1-202ENST00000376709 UBASH3BQ8TF42 649 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 ST6GAL2Q96JF0 529 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 KLHL15Q96M94 604 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 INTS14Q96SY0 518 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 WDR76Q9H967 626 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 NLKQ9UBE8 527 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 PATE3B3GLJ2 98 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 TRIM3O75382 744 aaPredicted RBP18.28■□□□□ 0.52
VSX1-202ENST00000376709 AKR7A3O95154 331 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 AHSA1O95433 338 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 RPS27P42677 84 aaKnown RBP18.28■□□□□ 0.52
VSX1-202ENST00000376709 ACKR1Q16570 336 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 ZNF671Q8TAW3 534 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 TMEM234Q8WY98 164 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 ORAI1Q96D31 301 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 ZNF486Q96H40 463 aaPredicted RBP18.28■□□□□ 0.52
VSX1-202ENST00000376709 MFRPQ9BY79 579 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.28■□□□□ 0.52
VSX1-202ENST00000376709 SLC25A18Q9H1K4 315 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 ADAMTS9Q9P2N4 1935 aa18.28■□□□□ 0.52
VSX1-202ENST00000376709 EXPH5Q8NEV8 1989 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 TRBV11-1A0A0K0K1C0 115 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 C2orf72A6NCS6 295 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 GPANK1O95872 356 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 HLA-DQA2P01906 255 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 EMP2P54851 167 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 RPL27P61353 136 aaKnown RBP18.27■□□□□ 0.52
VSX1-202ENST00000376709 PYHIN1Q6K0P9 492 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 ASB18Q6ZVZ8 466 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 DUSP18Q8NEJ0 188 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 OR5AK2Q8NH90 309 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 THEM6Q8WUY1 208 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 RNF166Q96A37 237 aaPredicted RBP18.27■□□□□ 0.52
VSX1-202ENST00000376709 DMRTB1Q96MA1 342 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 MNTQ99583 582 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 CTRCQ99895 268 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 ZCCHC4Q9H5U6 513 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 TMEM14AQ9Y6G1 99 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 CFAP54Q96N23 3096 aa18.27■□□□□ 0.52
VSX1-202ENST00000376709 HMX3A6NHT5 357 aa18.27■□□□□ 0.51
VSX1-202ENST00000376709 EEF1E1O43324 174 aaKnown RBP18.27■□□□□ 0.51
VSX1-202ENST00000376709 ZNF354AO60765 605 aaPredicted RBP18.27■□□□□ 0.51
VSX1-202ENST00000376709 UPK3AO75631 287 aa18.27■□□□□ 0.51
VSX1-202ENST00000376709 CENPAP49450 140 aa18.27■□□□□ 0.51
VSX1-202ENST00000376709 MRPL28Q13084 256 aaKnown RBP18.27■□□□□ 0.51
VSX1-202ENST00000376709 PPP1R3BQ86XI6 285 aa18.27■□□□□ 0.51
VSX1-202ENST00000376709 NUBPLQ8TB37 319 aa18.27■□□□□ 0.51
VSX1-202ENST00000376709 HAVCR2Q8TDQ0 301 aa18.27■□□□□ 0.51
VSX1-202ENST00000376709 CAPSLQ8WWF8 208 aa18.27■□□□□ 0.51
VSX1-202ENST00000376709 RGP1Q92546 391 aaPredicted RBP18.27■□□□□ 0.51
VSX1-202ENST00000376709 PMEPA1Q969W9 287 aa18.27■□□□□ 0.51
VSX1-202ENST00000376709 ABHD1Q96SE0 405 aa18.27■□□□□ 0.51
VSX1-202ENST00000376709 TSPAN10Q9H1Z9 355 aaPredicted RBP18.27■□□□□ 0.51
VSX1-202ENST00000376709 DDX28Q9NUL7 540 aaKnown RBP18.27■□□□□ 0.51
VSX1-202ENST00000376709 N6AMT1Q9Y5N5 214 aa18.27■□□□□ 0.51
VSX1-202ENST00000376709 PRSS37A4D1T9 235 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 PDCD5O14737 125 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 PIN1P1O15428 100 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 OR2T1O43869 369 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 DDOSTP39656 456 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 MAGEB1P43366 347 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 C17orf67Q0P5P2 114 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 ALKBH1Q13686 389 aaKnown RBP18.26■□□□□ 0.51
VSX1-202ENST00000376709 ZNF433Q8N7K0 673 aaPredicted RBP18.26■□□□□ 0.51
VSX1-202ENST00000376709 STK35Q8TDR2 534 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 NAT6Q93015 286 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 MOV10Q9HCE1 1003 aaKnown RBP18.26■□□□□ 0.51
VSX1-202ENST00000376709 GALNT9Q9HCQ5 603 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 FRRS1LQ9P0K9 344 aa18.26■□□□□ 0.51
VSX1-202ENST00000376709 NUFIP1Q9UHK0 495 aaKnown RBP18.26■□□□□ 0.51
VSX1-202ENST00000376709 LANCL1O43813 399 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 TRAPPC2P0DI81 140 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 TRAPPC2BP0DI82 140 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 ALOX5APP20292 161 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 SIGLEC14Q08ET2 396 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 TATDN3Q17R31 274 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 PHF19Q5T6S3 580 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 C5orf46Q6UWT4 87 aa18.25■□□□□ 0.51
VSX1-202ENST00000376709 PRR23CQ6ZRP0 262 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms