RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 CLDN17P56750 224 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 ISL1P61371 349 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 IL5RAQ01344 420 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 ZNF362Q5T0B9 420 aaPredicted RBP20.38■□□□□ 0.85
HLA-C-202ENST00000376237 RPTNQ6XPR3 784 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 THAP5Q7Z6K1 395 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 JAZF1Q86VZ6 243 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 DOLPP1Q86YN1 238 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 TCEANCQ8N8B7 351 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 ZIC4Q8N9L1 334 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 OR52E2Q8NGJ4 325 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 OR4K13Q8NH42 304 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 RHOXF1Q8NHV9 184 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 MBD3L2Q8NHZ7 208 aaPredicted RBP20.38■□□□□ 0.85
HLA-C-202ENST00000376237 TMEM45BQ96B21 275 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 RASD2Q96D21 266 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 SLC25A44Q96H78 314 aaPredicted RBP20.38■□□□□ 0.85
HLA-C-202ENST00000376237 ZNF385AQ96PM9 386 aaKnown RBP20.38■□□□□ 0.85
HLA-C-202ENST00000376237 PARPBPQ9NWS1 579 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 BSNQ9UPA5 3926 aa20.38■□□□□ 0.85
HLA-C-202ENST00000376237 SLC35F4A4IF30 521 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 PAICSP22234 425 aaKnown RBP20.37■□□□□ 0.85
HLA-C-202ENST00000376237 SNRPGP62308 76 aaKnown RBP20.37■□□□□ 0.85
HLA-C-202ENST00000376237 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.37■□□□□ 0.85
HLA-C-202ENST00000376237 MED21Q13503 144 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 MELKQ14680 651 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 MESTQ5EB52 335 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 PLXDC2Q6UX71 529 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 B3GNT6Q6ZMB0 384 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 ENTHD1Q8IYW4 607 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 TMEM163Q8TC26 289 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 FNDC8Q8TC99 324 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 M0R3G1 203 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 ARHGEF9O43307 516 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 TLX2O43763 284 aaPredicted RBP20.37■□□□□ 0.85
HLA-C-202ENST00000376237 PRKYO43930 277 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 CASP6P55212 293 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 EIF2S3LQ2VIR3 472 aaKnown RBP20.37■□□□□ 0.85
HLA-C-202ENST00000376237 TMEM201Q5SNT2 666 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 SLC25A30Q5SVS4 291 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 RTL6Q6ICC9 239 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 TUSC5Q8IXB3 177 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 FAM26EQ8N5C1 309 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 NPEPL1Q8NDH3 523 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 ZNF566Q969W8 418 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 ZFP3Q96NJ6 502 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 EMC6Q9BV81 110 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 ZNF226Q9NYT6 803 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 RNF6Q9Y252 685 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 NOSIPQ9Y314 301 aaKnown RBP20.37■□□□□ 0.85
HLA-C-202ENST00000376237 FAM215AQ9Y5M1 114 aa20.37■□□□□ 0.85
HLA-C-202ENST00000376237 PRRC2CQ9Y520 2896 aaKnown RBP20.36■□□□□ 0.85
HLA-C-202ENST00000376237 PRSS37A4D1T9 235 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 SS18L1O75177 396 aaPredicted RBP20.36■□□□□ 0.85
HLA-C-202ENST00000376237 SLC2A10O95528 541 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 RENP00797 406 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 IGHG1P01857 330 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 NR2C1P13056 603 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 TIMP3P35625 211 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 CDKN2AP42771 156 aaKnown RBP20.36■□□□□ 0.85
HLA-C-202ENST00000376237 ITGADQ13349 1161 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 KRT80Q6KB66 452 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 SLC37A3Q8NCC5 494 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 SDR9C7Q8NEX9 313 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 UBE2FQ969M7 185 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 INTS12Q96CB8 462 aaKnown RBP20.36■□□□□ 0.85
HLA-C-202ENST00000376237 CNBD2Q96M20 576 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 Q96MT0 163 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 IL4I1Q96RQ9 567 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 KCNK17Q96T54 332 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 NMNAT3Q96T66 252 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 ALG12Q9BV10 488 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 MRPL13Q9BYD1 178 aaKnown RBP20.36■□□□□ 0.85
HLA-C-202ENST00000376237 RASSF1Q9NS23 344 aa20.36■□□□□ 0.85
HLA-C-202ENST00000376237 KIAA1549Q9HCM3 1950 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 PRR23D1E9PI22 279 aaPredicted RBP20.35■□□□□ 0.85
HLA-C-202ENST00000376237 MRPL33O75394 65 aaKnown RBP20.35■□□□□ 0.85
HLA-C-202ENST00000376237 TRMUO75648 421 aaKnown RBP20.35■□□□□ 0.85
HLA-C-202ENST00000376237 ZNF432O94892 652 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 CRHP06850 196 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 PRR23D2P0DMB1 279 aaPredicted RBP20.35■□□□□ 0.85
HLA-C-202ENST00000376237 TEKQ02763 1124 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 CRMP1Q14194 572 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 MAD2L1BPQ15013 274 aaPredicted RBP20.35■□□□□ 0.85
HLA-C-202ENST00000376237 MEDAGQ5VYS4 303 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 LEG1Q6P5S2 330 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 AAED1Q7RTV5 226 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 MARVELD2Q8N4S9 558 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 LRR1Q96L50 414 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 DDOQ99489 341 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 VSX1Q9NZR4 365 aaPredicted RBP20.35■□□□□ 0.85
HLA-C-202ENST00000376237 GPR52Q9Y2T5 361 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 NBEAQ8NFP9 2946 aa20.35■□□□□ 0.85
HLA-C-202ENST00000376237 SVILO95425 2214 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 OR6C65A6NJZ3 312 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 KDM4EB2RXH2 506 aaPredicted RBP20.34■□□□□ 0.85
HLA-C-202ENST00000376237 IL2RAP01589 272 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 GABRB1P18505 474 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 CD47Q08722 323 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 NIPAL3Q6P499 406 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms