RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 EXOSC3Q9NQT5 275 aaKnown RBP12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 PILRAQ9UKJ1 303 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 MOKQ9UQ07 419 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 CYR61O00622 381 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 CTNSO60931 367 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 GLSO94925 669 aaPredicted RBP12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 SPDEFO95238 335 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 IFNA16P05015 189 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 C5AR1P21730 350 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 RPS27P42677 84 aaKnown RBP12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 CDKN2AP42771 156 aaKnown RBP12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 EFNB2P52799 333 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 IL10RAQ13651 578 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 CCINQ13939 588 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 LINC01590Q5TEZ4 76 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 LIPNQ5VXI9 398 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 LEG1Q6P5S2 330 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 GSG1LQ6UXU4 331 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 GLB1L2Q8IW92 636 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 RELL2Q8NC24 303 aaPredicted RBP12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 OR1S1Q8NH92 325 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 STK35Q8TDR2 534 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 ALG12Q9BV10 488 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 KCNK15Q9H427 330 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 FRRS1LQ9P0K9 344 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 RABL2AQ9UBK7 228 aaPredicted RBP12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 FBXL21Q9UKT6 434 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 CA14Q9ULX7 337 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 RABL2BQ9UNT1 228 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 HEATR5AQ86XA9 2040 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 KRBOX1C9JBD0 128 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 H0YGG7 62 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 HRKO00198 91 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 FGF2P09038 288 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 CALCBP10092 127 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 PPP3CBP16298 524 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 DRD1P21728 446 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 ARF3P61204 181 aaPredicted RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 MAT1AQ00266 395 aaKnown RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 PSG6Q00889 435 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 LTBQ06643 244 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 PRRT3Q5FWE3 981 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 ZNF684Q5T5D7 378 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 ZNF776Q68DI1 518 aaPredicted RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 ULK3Q6PHR2 472 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 FIGLAQ6QHK4 219 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 ZNF454Q8N9F8 522 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 BVESQ8NE79 360 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 RPS4Y2Q8TD47 263 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 ULBP3Q9BZM4 244 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 NMNAT2Q9BZQ4 307 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 C8orf33Q9H7E9 229 aaPredicted RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 MKKSQ9NPJ1 570 aaPredicted RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 UBE2QL1A1L167 161 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 POM121BA6NF01 834 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 BLOC1S5-TXNDC5H3BN57 136 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 RBBP9O75884 186 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 NKX2-2O95096 273 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 PGDP52209 483 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 TDGQ13569 410 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 GK2Q14410 553 aaPredicted RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 Q499Y3 187 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 OTPQ5XKR4 325 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 ZNF660Q6AZW8 331 aaPredicted RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 DPY19L2P2Q6ZN68 376 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 LRRTM1Q86UE6 522 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 OR2AK2Q8NG84 335 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 OR51A4Q8NGJ6 313 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 OR5AK2Q8NH90 309 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 DVL3Q92997 716 aaPredicted RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 MRGPRX1Q96LB2 322 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 ADAD1Q96M93 576 aaKnown RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 SRA1Q9HD15 236 aaKnown RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 TMEM138Q9NPI0 162 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 RXFP3Q9NSD7 469 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 MED9Q9NWA0 146 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 MRM2Q9UI43 246 aaKnown RBP12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 DTX4Q9Y2E6 619 aa12.85□□□□□ -0.35
CLCNKA-202ENST00000375692 TMEM272A0A1B0GTI8 110 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 TVP23AA6NH52 213 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 F5H5P2 479 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 PRKNO60260 465 aaPredicted RBP12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 UPK3AO75631 287 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 KDM4BO94953 1096 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 RASGRP1O95267 797 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 MECP2P51608 486 aaKnown RBP12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 RPS21P63220 83 aaKnown RBP12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 MRPS10P82664 201 aaKnown RBP12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 B3GNTL1Q67FW5 361 aaPredicted RBP12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 ABHD13Q7L211 337 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 OR51S1Q8NGJ8 323 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 OR8S1Q8NH09 359 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 TSACCQ96A04 125 aaPredicted RBP12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 DPYSL5Q9BPU6 564 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 SLITRK2Q9H156 845 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 PRSS38A1L453 326 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 HMSDA8MTL9 139 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 GLCEO94923 617 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 ADH1BP00325 375 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 AK1P00568 194 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms