RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SGCZQ96LD1 299 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF416Q9BWM5 594 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 OR10A2Q9H208 303 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 FGF22Q9HCT0 170 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 A0A0A6YYJ9 748 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 K7EPK0 472 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 SUSD5O60279 629 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF28P17035 718 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 M6PRP20645 277 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 PPT1P50897 306 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 DUSP3P51452 185 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 MPEG1Q2M385 716 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 YOD1Q5VVQ6 348 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 UNQ6126/PRO20091Q6UXV3 157 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF100Q8IYN0 542 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 FAM71E2Q8N5Q1 922 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 OR56B1Q8NGI3 324 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 NXPE3Q969Y0 559 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 TCTN2Q96GX1 697 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 DCLRE1CQ96SD1 692 aaKnown RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ULBP3Q9BZM4 244 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 KIR3DX1Q9H7L2 352 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 CUTCQ9NTM9 273 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 LOC100289279A0A1B0GTE1 492 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 CIB4A0PJX0 185 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 H3BNC9 293 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 CTNSO60931 367 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 PRSS23O95084 383 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 TAS2R46P59540 309 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ARHGAP11BQ3KRB8 267 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ACTBL2Q562R1 376 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 RTL6Q6ICC9 239 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 RLN3Q8WXF3 142 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 ELF4Q99607 663 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 DNTTIP1Q9H147 329 aa10.63□□□□□ -0.71
PTCH1-203ENST00000375274 MBNL1Q9NR56 388 aaKnown RBP10.63□□□□□ -0.71
PTCH1-203ENST00000375274 TRAV36DV7A0A075B6V5 113 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 SMCO3A2RU48 225 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 GJE1A6NN92 205 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 SURF4O15260 269 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 HBQ1P09105 142 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 FASLGP48023 281 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 OR10A3P58181 314 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 SEC61A1P61619 476 aaKnown RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 KCNG3Q8TAE7 436 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 RNF141Q8WVD5 230 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 OR2A14Q96R47 310 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 CDCA3Q99618 268 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 ARPC5LQ9BPX5 153 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 TSPAN10Q9H1Z9 355 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 SPHK1Q9NYA1 384 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 TRAPPC4Q9Y296 219 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 DOK2O60496 412 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 KCNK2O95069 426 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 WNT3P56703 355 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 DBPQ10586 325 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 DUSP8Q13202 625 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF674Q2M3X9 581 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 PXDC1Q5TGL8 231 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 CMIPQ8IY22 773 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 LCORQ96JN0 433 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 OR52A5Q9H2C5 316 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 ADAM18Q9Y3Q7 739 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 SPAG17Q6Q759 2223 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 HIST1H1CP16403 213 aaKnown RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 PXNP49023 591 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 HCCSP53701 268 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 CD300CQ08708 224 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 TMEM31Q5JXX7 168 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 EXOSC6Q5RKV6 272 aaKnown RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 CAMKMTQ7Z624 323 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 OR5T1Q8NG75 326 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 SLAMF7Q9NQ25 335 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 SDHAF2Q9NX18 166 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 KLHL13Q9P2N7 655 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 NHSQ6T4R5 1651 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 HOXC11O43248 304 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 CALCBP10092 127 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 HOXB9P17482 250 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 PCMT1P22061 227 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 TPMTP51580 245 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 POLR2HP52434 150 aaKnown RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 C5orf46Q6UWT4 87 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 TMUB2Q71RG4 321 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 SUMF2Q8NBJ7 301 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 VN1R2Q8NFZ6 395 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 OR1S1Q8NH92 325 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 RNF128Q8TEB7 428 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 BCL7CQ8WUZ0 217 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-203ENST00000375274 MIB2Q96AX9 1013 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 TCEAL7Q9BRU2 100 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 SPNS1Q9H2V7 528 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 NELFAQ9H3P2 528 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 FTSJ1Q9UET6 329 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 SUSD2Q9UGT4 822 aa10.62□□□□□ -0.71
PTCH1-203ENST00000375274 GLI3P10071 1580 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 FITM1A5D6W6 292 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 UPK1AO00322 258 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 MAGEB4O15481 346 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-203ENST00000375274 TXNL1O43396 289 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms