RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 PTGS2P35354 604 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 RPL4P36578 427 aaKnown RBP13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 LSAMPQ13449 338 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 POU4F3Q15319 338 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 PGGHGQ32M88 737 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 TMEM236Q5W0B7 351 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 C12orf73Q69YU5 71 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 ABLIM2Q6H8Q1 611 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 ACSM5Q6NUN0 579 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 CHMP1BQ7LBR1 199 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 ADGRE4PQ86SQ3 457 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 IGFN1Q86VF2 1251 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 CCDC103Q8IW40 242 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 ANKK1Q8NFD2 765 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 OR8J1Q8NGP2 316 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 OR4Q3Q8NH05 313 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 SIGLEC11Q96RL6 698 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 COPS4Q9BT78 406 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 KATNB1Q9BVA0 655 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 IFT27Q9BW83 186 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 SF3B5Q9BWJ5 86 aaKnown RBP13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 TEX12Q9BXU0 123 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 FKBP14Q9NWM8 211 aa13.07□□□□□ -0.32
SMPDL3B-201ENST00000373888 SPTA1P02549 2419 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 ATXN7O15265 892 aaPredicted RBP13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 ZNHIT1O43257 154 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 CYTIPO60759 359 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 SYNGR4O95473 234 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 IGHMP01871 453 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 F13BP05160 661 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 GRK5P34947 590 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 CTXN1P60606 82 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 EMX1Q04741 257 aaPredicted RBP13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 PON3Q15166 354 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 TMEM201Q5SNT2 666 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 GPR107Q5VW38 600 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 TMEM225Q6GV28 225 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 NHLRC1Q6VVB1 395 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 FCRLAQ7L513 359 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 FAM122BQ7Z309 247 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 KDM8Q8N371 416 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 RNF128Q8TEB7 428 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 OXGR1Q96P68 337 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 ERVK-18Q9QC07 812 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 ADAM18Q9Y3Q7 739 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 ZNF175Q9Y473 711 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 NOX1Q9Y5S8 564 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 KIAA1549Q9HCM3 1950 aa13.06□□□□□ -0.32
SMPDL3B-201ENST00000373888 EPG5Q9HCE0 2579 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 AHRRA9YTQ3 701 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 IMPA2O14732 288 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 IDH3BO43837 385 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 PPP1R3DO95685 299 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 TXNDC12O95881 172 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 PIPP12273 146 aaPredicted RBP13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 HLA-DOBP13765 273 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 EDN3P14138 238 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 SLC16A1P53985 500 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 ERVK-25P63136 954 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 POU3F1Q03052 451 aaPredicted RBP13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 SLC17A1Q14916 467 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 TBCEQ15813 527 aaPredicted RBP13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 SLC25A30Q5SVS4 291 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 MEDAGQ5VYS4 303 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 AHSA2Q719I0 299 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 GPAT4Q86UL3 456 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 UEVLDQ8IX04 471 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 OR5M9Q8NGP3 310 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 FNDC9Q8TBE3 224 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 ROBO4Q8WZ75 1007 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 UBE2FQ969M7 185 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 C12orf43Q96C57 262 aaKnown RBP13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 TSPAN32Q96QS1 320 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 POLDIP3Q9BY77 421 aaKnown RBP13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 TXNIPQ9H3M7 391 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 CLCF1Q9UBD9 225 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 IER3IP1Q9Y5U9 82 aa13.05□□□□□ -0.32
SMPDL3B-201ENST00000373888 A0A1W2PRG6 482 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 SNTNA6NMZ2 147 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 ZNF716A6NP11 495 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 TRAF3IP2O43734 574 aaPredicted RBP13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 PLGP00747 810 aaPredicted RBP13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 MT-ND2P03891 347 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 HMGN1P05114 100 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 CDK1P06493 297 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 ZNF43P17038 809 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 SDHAP31040 664 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 NFATC3Q12968 1075 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 ACKR1Q16570 336 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 OCLNQ16625 522 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 SMN1Q16637 294 aaKnown RBP13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 EMC4Q5J8M3 183 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 SYT6Q5T7P8 510 aaPredicted RBP13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 GPR139Q6DWJ6 353 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 GFRALQ6UXV0 394 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 OR9K2Q8NGE7 335 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 FAM57AQ8TBR7 257 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 SGCDQ92629 289 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 ERMAPQ96PL5 475 aaPredicted RBP13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 ACOT13Q9NPJ3 140 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms