RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 PLCXD2Q0VAA5 305 aa21.57■■□□□ 1.04
CDK9-201ENST00000373264 ETFDHQ16134 617 aa21.57■■□□□ 1.04
CDK9-201ENST00000373264 OMA1Q96E52 524 aa21.57■■□□□ 1.04
CDK9-201ENST00000373264 PHF7Q9BWX1 381 aaPredicted RBP21.57■■□□□ 1.04
CDK9-201ENST00000373264 LAT2Q9GZY6 243 aa21.57■■□□□ 1.04
CDK9-201ENST00000373264 KLK11Q9UBX7 282 aa21.57■■□□□ 1.04
CDK9-201ENST00000373264 LAMP5Q9UJQ1 280 aa21.57■■□□□ 1.04
CDK9-201ENST00000373264 SLC6A5Q9Y345 797 aa21.57■■□□□ 1.04
CDK9-201ENST00000373264 MMACHCQ9Y4U1 282 aa21.57■■□□□ 1.04
CDK9-201ENST00000373264 COL6A3P12111 3177 aa21.57■■□□□ 1.04
CDK9-201ENST00000373264 GPRIN2O60269 458 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 CDC40O60508 579 aaKnown RBP eCLIP21.56■■□□□ 1.04
CDK9-201ENST00000373264 S100A1P23297 94 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 CXCR1P25024 350 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 ABCD3P28288 659 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 ERP29P30040 261 aaKnown RBP21.56■■□□□ 1.04
CDK9-201ENST00000373264 MAB21L1Q13394 359 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 KLF9Q13886 244 aaPredicted RBP21.56■■□□□ 1.04
CDK9-201ENST00000373264 ELAVL1Q15717 326 aaKnown RBP21.56■■□□□ 1.04
CDK9-201ENST00000373264 UBE2NLQ5JXB2 153 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 TIGD3Q6B0B8 471 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 FAAP20Q6NZ36 180 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 STAC2Q6ZMT1 411 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 KDM8Q8N371 416 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 SLC25A45Q8N413 288 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 OR5AK2Q8NH90 309 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 SCMH1Q96GD3 660 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 DPYSL5Q9BPU6 564 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 WWTR1Q9GZV5 400 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 ZNF304Q9HCX3 659 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 EPHA6Q9UF33 1036 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 OR5V1Q9UGF6 321 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 CEP192Q8TEP8 1941 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 MUC3AQ02505 3323 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 AIPO00170 330 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 BGLAPP02818 100 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 FBLP22087 321 aaKnown RBP21.56■■□□□ 1.04
CDK9-201ENST00000373264 BTG1P62324 171 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 GALK2Q01415 458 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 ALKBH1Q13686 389 aaKnown RBP21.56■■□□□ 1.04
CDK9-201ENST00000373264 ARHGAP40Q5TG30 622 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 OR52I2Q8NH67 350 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 THAP3Q8WTV1 239 aaPredicted RBP21.56■■□□□ 1.04
CDK9-201ENST00000373264 NUDT22Q9BRQ3 303 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 MED28Q9H204 178 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 HSPB11Q9Y547 144 aa21.56■■□□□ 1.04
CDK9-201ENST00000373264 TSPAN2O60636 221 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 MAS1P04201 325 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 HIST1H2ABP04908 130 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 CENPAP49450 140 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 HIST3H2AQ7L7L0 130 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 PRSS35Q8N3Z0 413 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 DEDD2Q8WXF8 326 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 PIGKQ92643 395 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 HIST1H2ACQ93077 130 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 OR1F2PQ96R84 312 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 PTDSS2Q9BVG9 487 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 TBL1XR1Q9BZK7 514 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 RCE1Q9Y256 329 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 V9GY05 133 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 TRIM3O75382 744 aaPredicted RBP21.55■■□□□ 1.04
CDK9-201ENST00000373264 TXNDC12O95881 172 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 WNT11O96014 354 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 CD1AP06126 327 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 IL11P20809 199 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 HSF2Q03933 536 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 DMWDQ09019 674 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 MRPL28Q13084 256 aaKnown RBP21.55■■□□□ 1.04
CDK9-201ENST00000373264 HLA-DQA1Q5Y7H0 255 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 FAM220AQ7Z4H9 259 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 SMIM4Q8WVI0 70 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 ZNF222Q9UK12 451 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 NUP210LQ5VU65 1888 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 TRIOBPQ9H2D6 2365 aa21.55■■□□□ 1.04
CDK9-201ENST00000373264 ANKRD34BA5PLL1 514 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 ZNF354AO60765 605 aaPredicted RBP21.54■■□□□ 1.04
CDK9-201ENST00000373264 ZNF780AO75290 641 aaPredicted RBP21.54■■□□□ 1.04
CDK9-201ENST00000373264 FREM3P0C091 2139 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 SNTB2Q13425 540 aaKnown RBP21.54■■□□□ 1.04
CDK9-201ENST00000373264 LRRN1Q6UXK5 716 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 APEHP13798 732 aaKnown RBP21.54■■□□□ 1.04
CDK9-201ENST00000373264 ALOX5APP20292 161 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 MEP1BQ16820 701 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 BICRALQ6AI39 1079 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 LYPD8Q6UX82 237 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 TMPRSS9Q7Z410 1059 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 LIX1LQ8IVB5 337 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 SYNPRQ8TBG9 265 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 DUSP15Q9H1R2 295 aaPredicted RBP21.54■■□□□ 1.04
CDK9-201ENST00000373264 KCNK15Q9H427 330 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 SLA2Q9H6Q3 261 aa21.54■■□□□ 1.04
CDK9-201ENST00000373264 C7orf66A4D0T2 115 aa21.53■■□□□ 1.04
CDK9-201ENST00000373264 HLA-DQA2P01906 255 aa21.53■■□□□ 1.04
CDK9-201ENST00000373264 PITPNAQ00169 270 aa21.53■■□□□ 1.04
CDK9-201ENST00000373264 TNK1Q13470 666 aa21.53■■□□□ 1.04
CDK9-201ENST00000373264 ST3GAL2Q16842 350 aa21.53■■□□□ 1.04
CDK9-201ENST00000373264 Q499Y3 187 aa21.53■■□□□ 1.04
CDK9-201ENST00000373264 EEF1A1P5Q5VTE0 462 aa21.53■■□□□ 1.04
CDK9-201ENST00000373264 PWWP2BQ6NUJ5 590 aa21.53■■□□□ 1.04
CDK9-201ENST00000373264 MDGA2Q7Z553 956 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms