RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PIGXQ8TBF5 258 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 M1APQ8TC57 530 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 SMARCD2Q92925 531 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 NTNG2Q96CW9 530 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 OTUB2Q96DC9 234 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 RIOK2Q9BVS4 552 aaKnown RBP9.79□□□□□ -0.84
TRERF1-203ENST00000372917 EIF5A2Q9GZV4 153 aaKnown RBP9.79□□□□□ -0.84
TRERF1-203ENST00000372917 MYOTQ9UBF9 498 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 TESQ9UGI8 421 aaKnown RBP9.79□□□□□ -0.84
TRERF1-203ENST00000372917 ZNF337Q9Y3M9 751 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 CYB5BO43169 146 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 DCNP07585 359 aaKnown RBP9.79□□□□□ -0.84
TRERF1-203ENST00000372917 CHRM4P08173 479 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 TBC1D3HP0C7X1 549 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 ACP2P11117 423 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 NTSP30990 170 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 NAA10P41227 235 aaPredicted RBP9.79□□□□□ -0.84
TRERF1-203ENST00000372917 GIPRP48546 466 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 ERVFC1-1P60608 527 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 LSM11P83369 360 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRERF1-203ENST00000372917 RAB40BQ12829 278 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 ATP6V1FQ16864 119 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 PRAMEF20Q5VT98 475 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 GLB1LQ6UWU2 654 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 NDUFAF7Q7L592 441 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 ZNF573Q86YE8 665 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 NKAIN3Q8N8D7 197 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 BRIX1Q8TDN6 353 aaKnown RBP9.79□□□□□ -0.84
TRERF1-203ENST00000372917 GALNT14Q96FL9 552 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 ZNF426Q9BUY5 554 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 POPDC3Q9HBV1 291 aa9.79□□□□□ -0.84
TRERF1-203ENST00000372917 CHD3Q12873 2000 aaKnown RBP9.79□□□□□ -0.84
TRERF1-203ENST00000372917 PIRO00625 290 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 CDC14BO60729 498 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ADAP1O75689 374 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 TBX6O95947 436 aaPredicted RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ATP1B1P05026 303 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 PRSS56P0CW18 603 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ADRA1AP35348 466 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ID4P47928 161 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 CRYBA2P53672 197 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 HTRA3P83110 453 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ZP2Q05996 745 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ARHGAP1Q07960 439 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 NFATC4Q14934 902 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 SLC9A3R2Q15599 337 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ATXN7L2Q5T6C5 722 aaPredicted RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 CD163Q86VB7 1156 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 METTL27Q8N6F8 245 aaPredicted RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 OR5AP2Q8NGF4 316 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 OR6K2Q8NGY2 324 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 PPTC7Q8NI37 304 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 CORO2AQ92828 525 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 SNX22Q96L94 193 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ALKBH7Q9BT30 221 aaPredicted RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 EBPLQ9BY08 206 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 RNF222A6NCQ9 220 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 UMAD1C9J7I0 102 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 NFKBIEO00221 500 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 OGG1O15527 345 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ELFN1P0C7U0 828 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ATP1B3P54709 279 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ACTA2P62736 377 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ACTG2P63267 376 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ACTC1P68032 377 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ACTA1P68133 377 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 HMGN3Q15651 99 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 PRAMEF17Q5VTA0 474 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 FAM199XQ6PEV8 388 aaPredicted RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 IMP4Q96G21 291 aaKnown RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 RNF2Q99496 336 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ZNF649Q9BS31 505 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 POTEKPQ9BYX7 375 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 ASB6Q9NWX5 421 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 V9GYS6 101 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 SLC5A10A0PJK1 596 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 CXCL11O14625 94 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 AIFM1O95831 613 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 IL18BPO95998 194 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 COX7A2P14406 83 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 PGAM2P15259 253 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 PSEN2P49810 448 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 TNFSF10P50591 281 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 CEBPGP53567 150 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 MAP2K5Q13163 448 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 CTXN3Q4LDR2 81 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 KIRREL2Q6UWL6 708 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 CXCL17Q6UXB2 119 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 TMEM86AQ8N2M4 240 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 C12orf76Q8N812 135 aaPredicted RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 AMER3Q8N944 861 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 LGALS14Q8TCE9 139 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 SP7Q8TDD2 431 aaPredicted RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 PPP1R1CQ8WVI7 109 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 MFRPQ9BY79 579 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 PARP12Q9H0J9 701 aaKnown RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 TLR8Q9NR97 1041 aaKnown RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 LPAR3Q9UBY5 353 aa9.78□□□□□ -0.84
TRERF1-203ENST00000372917 NOP16Q9Y3C1 178 aaKnown RBP9.78□□□□□ -0.84
TRERF1-203ENST00000372917 TRBV11-1A0A0K0K1C0 115 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms