RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CLCC1Q96S66 551 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 SDF2Q99470 211 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 PAPOLGQ9BWT3 736 aaKnown RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 NMNAT2Q9BZQ4 307 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 RSPH9Q9H1X1 276 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 ZNF281Q9Y2X9 895 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 TRAPPC13A5PLN9 417 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 H3BSH0 61 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 OR2F2O95006 317 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 WNT11O96014 354 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 F2RL1P55085 397 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 TRA2BP62995 288 aaKnown RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 MESP2Q0VG99 397 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 DUSP8Q13202 625 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 OR2F1Q13607 317 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 MLF2Q15773 248 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 FAM46CQ5VWP2 391 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 PIK3IP1Q96FE7 263 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 DTD2Q96FN9 168 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 TOX2Q96NM4 488 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 NRIP2Q9BQI9 281 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 ZNF471Q9BX82 626 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 TEX12Q9BXU0 123 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 SELENOIQ9C0D9 397 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 DPEP2Q9H4A9 486 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 TMEM138Q9NPI0 162 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 VSIG4Q9Y279 399 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 ASF1AQ9Y294 204 aa10.62□□□□□ -0.71
SMARCA1-201ENST00000371121 UBE2QL1A1L167 161 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 CLTBP09497 229 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 BTF3P20290 206 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 HIST1H1TP22492 207 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 VWA2Q5GFL6 755 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 C9orf64Q5T6V5 341 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 TPGS2Q68CL5 300 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 ANKRD33Q7Z3H0 272 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 C17orf64Q86WR6 236 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 BEST3Q8N1M1 668 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 OR56A1Q8NGH5 318 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 OR52L1Q8NGH7 329 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 STOML3Q8TAV4 291 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 PAQR8Q8TEZ7 354 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 HIST1H2BAQ96A08 127 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 ACTRT3Q9BYD9 372 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 CXorf51AA0A1B0GTR3 108 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 M0QYG6 137 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 RD3LP0DJH9 198 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 PRF1P14222 555 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 ABCD3P28288 659 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 GPX4P36969 197 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 AKR1C3P42330 323 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 SSR2P43308 183 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 STARP49675 285 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 PPT1P50897 306 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 ILF3Q12906 894 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 RBM39Q14498 530 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 ARHGAP11BQ3KRB8 267 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 ABHD17CQ6PCB6 329 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 CORO6Q6QEF8 472 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 OR5K2Q8NHB8 316 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 GPX8Q8TED1 209 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 MYADMQ96S97 322 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 MRPS30Q9NP92 439 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 MRM2Q9UI43 246 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 PCDHGA1Q9Y5H4 931 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 GOLGA4Q13439 2230 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 H0YIZ8 118 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 RAD1O60671 282 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 RPN2P04844 631 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 LIPCP11150 499 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 RCC1P18754 421 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 CFPP27918 469 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 AVPR2P30518 371 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 RORAP35398 523 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 GMFBP60983 142 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 ACTA2P62736 377 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 POLR2LP62875 67 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 ACTG2P63267 376 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 FKBP1BP68106 108 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 NTHL1P78549 312 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 FAM166AQ6J272 317 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 LIN54Q6MZP7 749 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 ACOT7LQ6ZUV0 252 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 RTN4RL2Q86UN3 420 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 RNF113BQ8IZP6 322 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 OR2A1Q8NGT9 310 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 NUBPLQ8TB37 319 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 NMNAT3Q96T66 252 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 CNN2Q99439 309 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 RNF126Q9BV68 326 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 SEMA6CQ9H3T2 930 aa10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 APOBEC3BQ9UH17 382 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-201ENST00000371121 TBC1D3EA0A087X179 549 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 TRBV5-7A0A0A0MS05 114 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 FAM86C2PA6NEL3 165 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 MSGN1A6NI15 193 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 FAM171A2A8MVW0 826 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 KPNA3O00505 521 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 RBBP9O75884 186 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ZNF3P17036 446 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms