RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PLPP3O14495 311 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 ATP8B1O43520 1251 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 MGRN1O60291 552 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 UBL3O95164 117 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 TROVE2P10155 538 aaKnown RBP eCLIP13.98□□□□□ -0.17
VMA21-202ENST00000370361 APEHP13798 732 aaKnown RBP13.98□□□□□ -0.17
VMA21-202ENST00000370361 AQP1P29972 269 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 LSP1P33241 339 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 TUBA1BP68363 451 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 TUBA4AP68366 448 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 HGFACQ04756 655 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 ZP4Q12836 540 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 NPRL3Q12980 569 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 DAG1Q14118 895 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 TRMT5Q32P41 509 aaKnown RBP13.98□□□□□ -0.17
VMA21-202ENST00000370361 IQCCQ4KMZ1 466 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 CGB2Q6NT52 195 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 VHLLQ6RSH7 139 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 ZNF813Q6ZN06 617 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 TUBA1AQ71U36 451 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 PIWIL3Q7Z3Z3 882 aaKnown RBP13.98□□□□□ -0.17
VMA21-202ENST00000370361 HDDC2Q7Z4H3 204 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 MDP1Q86V88 176 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 COMTD1Q86VU5 262 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 OR6X1Q8NH79 312 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 HPS1Q92902 700 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 DOK1Q99704 481 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 FOXB1Q99853 325 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 RSPO3Q9BXY4 272 aaPredicted RBP13.98□□□□□ -0.17
VMA21-202ENST00000370361 POLR2J2Q9GZM3 115 aaKnown RBP13.98□□□□□ -0.17
VMA21-202ENST00000370361 POLR2J3Q9H1A7 115 aaKnown RBP13.98□□□□□ -0.17
VMA21-202ENST00000370361 DYNLRB1Q9NP97 96 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 B3GNT2Q9NY97 397 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 CMAHPQ9Y471 501 aa13.98□□□□□ -0.17
VMA21-202ENST00000370361 MXRA5Q9NR99 2828 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 DNHD1Q96M86 4753 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 TRAPPC13A5PLN9 417 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 RNF212BA8MTL3 300 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 RAB36O95755 333 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 HPRP00739 348 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 ZNF23P17027 643 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 NR4A1P22736 598 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 AHCYP23526 432 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 PCGF2P35227 344 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 THBS4P35443 961 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 CSNK1A1P48729 337 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 GUCY1A3Q02108 690 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 NFYCQ13952 458 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 GGTLC2Q14390 218 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 NRN1LQ496H8 165 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 TTC33Q6PID6 262 aaPredicted RBP13.97□□□□□ -0.17
VMA21-202ENST00000370361 NHLRC1Q6VVB1 395 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 PTOV1Q86YD1 416 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 MOGAT1Q96PD6 335 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 MS4A5Q9H3V2 200 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 KAT8Q9H7Z6 458 aaKnown RBP13.97□□□□□ -0.17
VMA21-202ENST00000370361 NOX3Q9HBY0 568 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 NANSQ9NR45 359 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 ZNF229Q9UJW7 825 aa13.97□□□□□ -0.17
VMA21-202ENST00000370361 FBN1P35555 2871 aaKnown RBP13.96□□□□□ -0.17
VMA21-202ENST00000370361 M0QX08 132 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 TPST2O60704 377 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 LY6HO94772 140 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 NPPAP01160 153 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 IGF2P01344 180 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 HIST1H2ABP04908 130 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 ADORA3P0DMS8 318 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 CD79AP11912 226 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 ZNF14P17017 642 aaPredicted RBP13.96□□□□□ -0.17
VMA21-202ENST00000370361 ZNF16P17020 682 aaPredicted RBP13.96□□□□□ -0.17
VMA21-202ENST00000370361 CBLP22681 906 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 GLRXP35754 106 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 CHN2P52757 468 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 GALK2Q01415 458 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 SNTB2Q13425 540 aaKnown RBP13.96□□□□□ -0.17
VMA21-202ENST00000370361 CYLC2Q14093 348 aaPredicted RBP13.96□□□□□ -0.17
VMA21-202ENST00000370361 ZNF74Q16587 644 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 DUSP7Q16829 419 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 ENTPD8Q5MY95 495 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 CARD17Q5XLA6 110 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 HIST3H2AQ7L7L0 130 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 SPATA21Q7Z572 469 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 RETREG3Q86VR2 466 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 ZNF786Q8N393 782 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 SMYD1Q8NB12 490 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 SLC26A7Q8TE54 656 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 ADAMTS16Q8TE57 1224 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 HIST1H2ACQ93077 130 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 ZNF837Q96EG3 531 aaPredicted RBP13.96□□□□□ -0.17
VMA21-202ENST00000370361 FOXN4Q96NZ1 517 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 ZNF426Q9BUY5 554 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 C1orf198Q9H425 327 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 MED29Q9NX70 200 aa13.96□□□□□ -0.17
VMA21-202ENST00000370361 STX18Q9P2W9 335 aaKnown RBP13.96□□□□□ -0.17
VMA21-202ENST00000370361 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.95□□□□□ -0.184e-14■■■■■ 27.9
VMA21-202ENST00000370361 LOC100289279A0A1B0GTE1 492 aa13.95□□□□□ -0.18
VMA21-202ENST00000370361 SLC22A23A1A5C7 686 aa13.95□□□□□ -0.18
VMA21-202ENST00000370361 CENPBD1B2RD01 187 aa13.95□□□□□ -0.18
VMA21-202ENST00000370361 SYNGR3O43761 229 aa13.95□□□□□ -0.18
VMA21-202ENST00000370361 FARS2O95363 451 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms