RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 OR13C2Q8NGS9 318 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 FNDC8Q8TC99 324 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 HSD17B8Q92506 261 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 MUCL1Q96DR8 90 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 SLC25A44Q96H78 314 aaPredicted RBP12.15□□□□□ -0.46
SSR4-202ENST00000370085 TNFRSF13CQ96RJ3 184 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 BDH2Q9BUT1 245 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 EMC6Q9BV81 110 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 TXNIPQ9H3M7 391 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 ZNF556Q9HAH1 456 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 ARMC1Q9NVT9 282 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 MED29Q9NX70 200 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 GRHPRQ9UBQ7 328 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 MGAT4BQ9UQ53 548 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 U3KQV3 271 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 XKRYO14609 159 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 CDC42EP2O14613 210 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 FUT4P22083 530 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 IGHV1-2P23083 117 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 PAX7P23759 505 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 FASP25445 335 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 SSTR2P30874 369 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 NTF4P34130 210 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 CTXN1P60606 82 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 RPL27P61353 136 aaKnown RBP12.14□□□□□ -0.47
SSR4-202ENST00000370085 LSM11P83369 360 aaKnown RBP eCLIP12.14□□□□□ -0.47
SSR4-202ENST00000370085 TSPAN31Q12999 210 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 CAMK2DQ13557 499 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 ACKR1Q16570 336 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 ZSCAN26Q16670 478 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 CARD17Q5XLA6 110 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 FBXW10Q5XX13 1052 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 C1orf94Q6P1W5 598 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 ZFP1Q6P2D0 407 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 SMARCD3Q6STE5 483 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 ZER1Q7Z7L7 766 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 C20orf196Q8IYI0 205 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 TMEM123Q8N131 208 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 C17orf78Q8N4C9 275 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 ZNF433Q8N7K0 673 aaPredicted RBP12.14□□□□□ -0.47
SSR4-202ENST00000370085 OR52L1Q8NGH7 329 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 MOSPD2Q8NHP6 518 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 LINC01560Q8TB33 94 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 FANK1Q8TC84 345 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 GIPC3Q8TF64 312 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 TXNDC15Q96J42 360 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 ALKBH3Q96Q83 286 aaPredicted RBP12.14□□□□□ -0.47
SSR4-202ENST00000370085 POLDIP3Q9BY77 421 aaKnown RBP12.14□□□□□ -0.47
SSR4-202ENST00000370085 ULBP2Q9BZM5 246 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 MOV10Q9HCE1 1003 aaKnown RBP12.14□□□□□ -0.47
SSR4-202ENST00000370085 CRIM1Q9NZV1 1036 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 SIGLEC7Q9Y286 467 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 CRYBG3Q68DQ2 2970 aa12.14□□□□□ -0.47
SSR4-202ENST00000370085 ARRDC5A6NEK1 342 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 RPL36A-HNRNPH2H7BZ11 118 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 M0R3G1 203 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 IGHMP01871 453 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 CD14P08571 375 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 SLC6A6P31641 620 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 RPS6KA3P51812 740 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 ACTR3P61158 418 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 ROR2Q01974 943 aaKnown RBP12.13□□□□□ -0.47
SSR4-202ENST00000370085 COX10Q12887 443 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 TOP3AQ13472 1001 aaPredicted RBP12.13□□□□□ -0.47
SSR4-202ENST00000370085 CCNIQ14094 377 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 MELKQ14680 651 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 STK11Q15831 433 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 TIMM23BQ5SRD1 257 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 ANKRD34AQ69YU3 496 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 GPR139Q6DWJ6 353 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 PGBD2Q6P3X8 592 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 MEX3DQ86XN8 651 aaKnown RBP12.13□□□□□ -0.47
SSR4-202ENST00000370085 AQP11Q8NBQ7 271 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 OR10G2Q8NGC3 310 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 OR4C15Q8NGM1 316 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 UTP4Q969X6 686 aaKnown RBP12.13□□□□□ -0.47
SSR4-202ENST00000370085 S100PBPQ96BU1 408 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 DUS3LQ96G46 650 aaKnown RBP12.13□□□□□ -0.47
SSR4-202ENST00000370085 CRLF2Q9HC73 371 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 POFUT2Q9Y2G5 429 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 MAGED1Q9Y5V3 778 aaPredicted RBP12.13□□□□□ -0.47
SSR4-202ENST00000370085 ALPK2Q86TB3 2170 aa12.13□□□□□ -0.47
SSR4-202ENST00000370085 OR5H1A6NKK0 313 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 KLF4O43474 513 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 AHCYL1O43865 530 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 UPK3AO75631 287 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 TIPRLO75663 272 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 RAD51DO75771 328 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 WNT11O96014 354 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 HOXB1P14653 301 aaPredicted RBP12.12□□□□□ -0.47
SSR4-202ENST00000370085 ACADSP16219 412 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 CDH2P19022 906 aaPredicted RBP12.12□□□□□ -0.47
SSR4-202ENST00000370085 EDNRAP25101 427 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 NOS3P29474 1203 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 CCKARP32238 428 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 GUCA1AP43080 201 aaPredicted RBP12.12□□□□□ -0.47
SSR4-202ENST00000370085 GSSP48637 474 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 ZNF84P51523 738 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 UBE2NP61088 152 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms