RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ITCHQ96J02 903 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 TMED9Q9BVK6 235 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 PINK1Q9BXM7 581 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 NLNQ9BYT8 704 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 ADAM19Q9H013 955 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 GLRX2Q9NS18 164 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 LOC105369274A0A096LPK9 316 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 CXCR6O00574 342 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 MPZL2O60487 215 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 NSA2O95478 260 aaKnown RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 PDYNP01213 254 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 COX7A2P14406 83 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 MPGP29372 298 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 CASP6P55212 293 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 TMPRSS3P57727 454 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 RAE1P78406 368 aaKnown RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 ST3GAL4Q11206 333 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 SNAPC1Q16533 368 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 NKPD1Q17RQ9 610 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 FHL5Q5TD97 284 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 CNIH2Q6PI25 160 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 Q6ZPB1 254 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 THOC6Q86W42 341 aaKnown RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 OR4N4Q8N0Y3 316 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 MFSD9Q8NBP5 474 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 MDS2Q8NDY4 140 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 SLC24A4Q8NFF2 622 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 TCTEX1D2Q8WW35 142 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 TFGQ92734 400 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 FAM120BQ96EK7 910 aaKnown RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 MVB12AQ96EY5 273 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 ATF6BQ99941 703 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 TXNL4BQ9NX01 149 aaKnown RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 PISDQ9UG56 409 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 SAMD4AQ9UPU9 718 aaKnown RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 HCRTR2O43614 444 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 SLC28A2O43868 658 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 PRAMEF2O60811 474 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 RP2O75695 350 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 TNFSF15O95150 251 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 ABOP16442 354 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 POU3F2P20265 443 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 NFYAP23511 347 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 AHCYP23526 432 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 EPHA2P29317 976 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 PKIAP61925 76 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 RAP1AP62834 184 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 INPP5JQ15735 1006 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 BCL2L15Q5TBC7 163 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 FRG2Q64ET8 278 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 QSOX2Q6ZRP7 698 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 PLXDC1Q8IUK5 500 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 SPAG16Q8N0X2 631 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 PLPP5Q8NEB5 264 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 FAM46DQ8NEK8 389 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 OR2T12Q8NG77 320 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 OR10A6Q8NH74 314 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 ST7LQ8TDW4 575 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 ACOT12Q8WYK0 555 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 CTHRC1Q96CG8 243 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 MS4A4EQ96PG1 132 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 FRG2BQ96QU4 278 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 DPAGT1Q9H3H5 408 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 PELI2Q9HAT8 420 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 PRDM7Q9NQW5 492 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 NCOR2Q9Y618 2525 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 ELOVL7A1L3X0 281 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 B4DGG1 531 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 ICOSLGO75144 302 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 STK17BO94768 372 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 TGFB1P01137 390 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 IGKV3-11P04433 115 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 HIST1H2ABP04908 130 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 SLC35G4P0C7Q5 338 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 OR8G3PP0DMU2 310 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 TYRP1P17643 537 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 PSMA1P25786 263 aaKnown RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 BCL6P41182 706 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 CRATP43155 626 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 CASP9P55211 416 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 RPS7P62081 194 aaKnown RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 SMCO1Q147U7 214 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 C21orf62-AS1Q17RA5 79 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 SLC36A2Q495M3 483 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 HIST3H2AQ7L7L0 130 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 OR10Q1Q8NGQ4 319 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 HIST1H2ACQ93077 130 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 CNPPD1Q9BV87 410 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 SEC11CQ9BY50 192 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 SLAMF7Q9NQ25 335 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF222Q9UK12 451 aa6.24□□□□□ -1.41
CSDE1-204ENST00000369530 MRPS18BQ9Y676 258 aaKnown RBP6.24□□□□□ -1.41
CSDE1-204ENST00000369530 ARRDC5A6NEK1 342 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 RFXANKO14593 260 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF682O95780 498 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 PLGP00747 810 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 STATHP02808 62 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ANXA8P13928 327 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 SOAT1P35610 550 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 UCNP55089 124 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms