RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 SMAD3P84022 425 aaKnown RBP16.38■□□□□ 0.21
CHTOP-201ENST00000368686 CLLU1OSQ5K130 101 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 ATPAF1Q5TC12 328 aaPredicted RBP16.38■□□□□ 0.21
CHTOP-201ENST00000368686 WDR88Q6ZMY6 472 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 TMCO2Q7Z6W1 182 aaPredicted RBP16.38■□□□□ 0.21
CHTOP-201ENST00000368686 GALNT16Q8N428 558 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 GLYATL1Q969I3 302 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 ARMC5Q96C12 935 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 BPIFA2Q96DR5 249 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 RAB3CQ96E17 227 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 C14orf144Q96I85 54 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 SEMA6CQ9H3T2 930 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 PELI2Q9HAT8 420 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 MDC1Q14676 2089 aaKnown RBP16.37■□□□□ 0.21
CHTOP-201ENST00000368686 SLC31A2O15432 143 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 ZFPL1O95159 310 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 ZIC2O95409 532 aaPredicted RBP16.37■□□□□ 0.21
CHTOP-201ENST00000368686 RAB3DO95716 219 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 HLA-AP01891 365 aaKnown RBP16.37■□□□□ 0.21
CHTOP-201ENST00000368686 PGAM2P15259 253 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 ADRA2CP18825 462 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 RAB5AP20339 215 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 MAGEB1P43366 347 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 TAS2R60P59551 318 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 LMAN2Q12907 356 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 HMGN3Q15651 99 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 ZNF658BQ4V348 819 aaPredicted RBP16.37■□□□□ 0.21
CHTOP-201ENST00000368686 NKAIN2Q5VXU1 208 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 C22orf39Q6P5X5 142 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 TMEM205Q6UW68 189 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 C17orf64Q86WR6 236 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 SLC43A2Q8N370 569 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 PAQR4Q8N4S7 273 aaPredicted RBP16.37■□□□□ 0.21
CHTOP-201ENST00000368686 KDF1Q8NAX2 398 aaPredicted RBP16.37■□□□□ 0.21
CHTOP-201ENST00000368686 MALSU1Q96EH3 234 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 HRH4Q9H3N8 390 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 RPS10P5Q9NQ39 176 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 PRSS16Q9NQE7 514 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 FBXO4Q9UKT5 387 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 CDV3Q9UKY7 258 aaKnown RBP16.37■□□□□ 0.21
CHTOP-201ENST00000368686 TIMM10BQ9Y5J6 103 aa16.37■□□□□ 0.21
CHTOP-201ENST00000368686 A0A0A6YYD5 115 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 CPED1A4D0V7 1026 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 MEIS3P1A6NDR6 274 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 SMAD9O15198 467 aaKnown RBP16.36■□□□□ 0.21
CHTOP-201ENST00000368686 ERAL1O75616 437 aaKnown RBP16.36■□□□□ 0.21
CHTOP-201ENST00000368686 WNT11O96014 354 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 ITGA3P26006 1051 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 ZNF136P52737 540 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 PLA2G7Q13093 441 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 Q499Y3 187 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 EIPR1Q53HC9 387 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 ANGPTL5Q86XS5 388 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 TMEM229BQ8NBD8 167 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 LRFN5Q96NI6 719 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 ZNF426Q9BUY5 554 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 ACTRT3Q9BYD9 372 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 KPTNQ9Y664 436 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 TRAV18A0A075B6X5 111 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 FCMRO60667 390 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 POP4O95707 220 aaKnown RBP16.36■□□□□ 0.21
CHTOP-201ENST00000368686 CD5P06127 495 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 RHOP08100 348 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 ACKR3P25106 362 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 PDX1P52945 283 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 DEFB115Q30KQ5 88 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 AKIRIN2Q53H80 203 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 C9orf64Q5T6V5 341 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 ZNF836Q6ZNA1 936 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 NUP43Q8NFH3 380 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 RNASE11Q8TAA1 199 aaKnown RBP16.36■□□□□ 0.21
CHTOP-201ENST00000368686 FOXRED1Q96CU9 486 aaPredicted RBP16.36■□□□□ 0.21
CHTOP-201ENST00000368686 RSRP1Q9BUV0 290 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 LGR4Q9BXB1 951 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 SELENOIQ9C0D9 397 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 CACFD1Q9UGQ2 172 aa16.36■□□□□ 0.21
CHTOP-201ENST00000368686 YBX2Q9Y2T7 364 aaKnown RBP16.36■□□□□ 0.21
CHTOP-201ENST00000368686 TRAV27A0A087WT01 109 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 A6NLC8 198 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 ELAVL2Q12926 359 aaKnown RBP16.35■□□□□ 0.21
CHTOP-201ENST00000368686 OR4C11Q6IEV9 310 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 UBE3DQ7Z6J8 389 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 CCDC116Q8IYX3 515 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 AMER3Q8N944 861 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 GPX8Q8TED1 209 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 SMIM8Q96KF7 97 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 NECAB3Q96P71 396 aaPredicted RBP16.35■□□□□ 0.21
CHTOP-201ENST00000368686 MICU1Q9BPX6 476 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 MESP1Q9BRJ9 268 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 PPP1R14DQ9NXH3 145 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 WIF1Q9Y5W5 379 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 H7C4K7 107 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 NARSO43776 548 aaKnown RBP16.35■□□□□ 0.21
CHTOP-201ENST00000368686 SRPX2O60687 465 aaPredicted RBP16.35■□□□□ 0.21
CHTOP-201ENST00000368686 EOMESO95936 686 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 HMGA1P17096 107 aaKnown RBP16.35■□□□□ 0.21
CHTOP-201ENST00000368686 CSRP1P21291 193 aaKnown RBP16.35■□□□□ 0.21
CHTOP-201ENST00000368686 SLC6A6P31641 620 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 RBP2P50120 134 aa16.35■□□□□ 0.21
CHTOP-201ENST00000368686 NR0B2Q15466 257 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms