RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 ZNF629Q9UEG4 869 aaPredicted RBP9.96□□□□□ -0.81
EBF3-202ENST00000368648 YBX2Q9Y2T7 364 aaKnown RBP9.96□□□□□ -0.81
EBF3-202ENST00000368648 BORCS7-ASMTA0A0B4J1R7 106 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 ZNF850A8MQ14 1090 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 PRRT4C9JH25 899 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 HMGN4O00479 90 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 DVL2O14641 736 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 LPLP06858 475 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 DRD2P14416 443 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 AFF3P51826 1226 aaKnown RBP9.96□□□□□ -0.81
EBF3-202ENST00000368648 CSNK2A1P68400 391 aaPredicted RBP9.96□□□□□ -0.81
EBF3-202ENST00000368648 MEX3BQ6ZN04 569 aaKnown RBP9.96□□□□□ -0.81
EBF3-202ENST00000368648 PLA2G15Q8NCC3 412 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 CSNK2A3Q8NEV1 391 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 KCTD12Q96CX2 325 aaKnown RBP9.96□□□□□ -0.81
EBF3-202ENST00000368648 DLL4Q9NR61 685 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 FBXL4Q9UKA2 621 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 TRAPPC4Q9Y296 219 aa9.96□□□□□ -0.81
EBF3-202ENST00000368648 CDC14CA4D256 554 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 KDM4EB2RXH2 506 aaPredicted RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 H7C417 338 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 PYCARD-AS1I3L0S3 204 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 SYT5O00445 386 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 LGI1O95970 557 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 ZNF888P0CJ79 500 aaPredicted RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 LIMS3P0CW19 117 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 LIMS4P0CW20 117 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 MECP2P51608 486 aaKnown RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 CLEC12BQ2HXU8 276 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 AWAT2Q6E213 333 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 KCTD18Q6PI47 426 aaPredicted RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 ZNF687Q8N1G0 1237 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 RASD2Q96D21 266 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 LURAP1Q96LR2 239 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 STRADBQ9C0K7 418 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 NRIP3Q9NQ35 241 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 A0A087WV62 115 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 ZNF705FA8MVS1 300 aaPredicted RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 KLK8O60259 260 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 SBK2P0C263 348 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 ZNF705DP0CH99 300 aaPredicted RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 ZNF705BP0CI00 300 aaPredicted RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 CD22P20273 847 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 MAOAP21397 527 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 CCNOP22674 350 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 GNRHRP30968 328 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 CLDN6P56747 220 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 RPS27AP62979 156 aaKnown RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 UBA52P62987 128 aaKnown RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 MELKQ14680 651 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 MAPK14Q16539 360 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 FIGLAQ6QHK4 219 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 Q6ZTK2 550 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 FAM160A2Q8N612 972 aaPredicted RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 SIRT6Q8N6T7 355 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 TM4SF18Q96CE8 201 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 PEX11GQ96HA9 241 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 OR1F2PQ96R84 312 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 C1QTNF3Q9BXJ4 246 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 POFUT1Q9H488 388 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 VSX1Q9NZR4 365 aaPredicted RBP9.96□□□□□ -0.82
EBF3-202ENST00000368648 KLRF1Q9NZS2 232 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 FAM96BQ9Y3D0 163 aa9.96□□□□□ -0.82
EBF3-202ENST00000368648 NPIPA5E9PKD4 350 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 AIFM1O95831 613 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 IFNA17P01571 189 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 CD3DP04234 171 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 ATF1P18846 271 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 PRKAR1BP31321 381 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 CSF2RBP32927 897 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 POU3F4P49335 361 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 WNT3P56703 355 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 TIAL1Q01085 375 aaKnown RBP eCLIP9.95□□□□□ -0.82
EBF3-202ENST00000368648 SNTB1Q13884 538 aaKnown RBP9.95□□□□□ -0.82
EBF3-202ENST00000368648 C9orf152Q5JTZ5 239 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 UBE2NLQ5JXB2 153 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 SLC16A9Q7RTY1 509 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 SPRED2Q7Z698 418 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 NEURL3Q96EH8 262 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 PDXPQ96GD0 296 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 SELENOIQ9C0D9 397 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 TMEM38AQ9H6F2 299 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 NPIPA1Q9UND3 350 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 DOCK1Q14185 1865 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 TTC28Q96AY4 2481 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 TMPRSS11DO60235 418 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 KCNJ13O60928 360 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 HEXBP07686 556 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 HIST1H1TP22492 207 aaPredicted RBP9.95□□□□□ -0.82
EBF3-202ENST00000368648 TNFRSF4P43489 277 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 ALG10Q5BKT4 473 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 FAM71E1Q6IPT2 247 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 FAM83HQ6ZRV2 1179 aaPredicted RBP9.95□□□□□ -0.82
EBF3-202ENST00000368648 SHISA6Q6ZSJ9 500 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 CBARPQ8N350 705 aaPredicted RBP9.95□□□□□ -0.82
EBF3-202ENST00000368648 ZNF283Q8N7M2 679 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 WDR77Q9BQA1 342 aaPredicted RBP9.95□□□□□ -0.82
EBF3-202ENST00000368648 RSRP1Q9BUV0 290 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 PRTFDC1Q9NRG1 225 aa9.95□□□□□ -0.82
EBF3-202ENST00000368648 ZNF281Q9Y2X9 895 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms