RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 KRT74Q7RTS7 529 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 TMEM99Q8N816 258 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 OR1F2PQ96R84 312 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 LMF2Q9BU23 707 aaKnown RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 ALG8Q9BVK2 526 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 MKKSQ9NPJ1 570 aaPredicted RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 SIDT1Q9NXL6 827 aaKnown RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 DNAJB12Q9NXW2 375 aaKnown RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 SLC39A1Q9NY26 324 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 A0A1W2PPK0 400 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 hCG_1807616A0A1W2PRN6 198 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 TRAPPC13A5PLN9 417 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 J3QLW9 94 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 KDM4BO94953 1096 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 NGFRP08138 427 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 ZNF19P17023 458 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 MAKP20794 623 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 IL12BP29460 328 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 HTR1FP30939 366 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 ACVR1BP36896 505 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 PLCXD2Q0VAA5 305 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 EBPQ15125 230 aaKnown RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 ETFDHQ16134 617 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 EIPR1Q53HC9 387 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 ALG10BQ5I7T1 473 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 FAM27D1Q5T7N8 215 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 ZNF322Q6U7Q0 402 aaPredicted RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 KMT5CQ86Y97 462 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 AGBL5Q8NDL9 886 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 DUSP18Q8NEJ0 188 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 OR13C2Q8NGS9 318 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 TMEM239Q8WW34 195 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 METTL21AQ8WXB1 218 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 MVB12AQ96EY5 273 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 WBP1Q96G27 269 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 EDEM2Q9BV94 578 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 ZNF292O60281 2723 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 MAP1BP46821 2468 aaKnown RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 SHISA3A0PJX4 238 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 SLC43A1O75387 559 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 UTS2O95399 124 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 GPR176Q14439 515 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 TOMM34Q15785 309 aaPredicted RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 TMEM44Q2T9K0 475 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 POGLUT1Q8NBL1 392 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 DAZLQ92904 295 aaKnown RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 PRSS27Q9BQR3 290 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 HCAR1Q9BXC0 346 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 REG4Q9BYZ8 158 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 EXTL2Q9UBQ6 330 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 SRPK3Q9UPE1 567 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 PTRH2Q9Y3E5 179 aaKnown RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 TRBV11-1A0A0K0K1C0 115 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 PRR23D1E9PI22 279 aaPredicted RBP9.68□□□□□ -0.86
TPM3-212ENST00000368533 HCRTR2O43614 444 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 SOX30O94993 753 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 F10P00742 488 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 OPN1LWP04000 364 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 PRR23D2P0DMB1 279 aaPredicted RBP9.68□□□□□ -0.86
TPM3-212ENST00000368533 PNLIPP16233 465 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 DNASE1P24855 282 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ATP12AP54707 1039 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 FBXW4P57775 412 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ZSWIM7Q19AV6 140 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 SFRP5Q5T4F7 317 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 MTFR2Q6P444 385 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ALKAL2Q6UX46 152 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 TMEM91Q6ZNR0 172 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 LURAP1LQ8IV03 231 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ADAMTS18Q8TE60 1221 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 LCORQ96JN0 433 aaPredicted RBP9.68□□□□□ -0.86
TPM3-212ENST00000368533 HS6ST2Q96MM7 605 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ATF6BQ99941 703 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 MED18Q9BUE0 208 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 PPP1R3EQ9H7J1 279 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 MRPS18AQ9NVS2 196 aaKnown RBP9.68□□□□□ -0.86
TPM3-212ENST00000368533 SEMA5BQ9P283 1151 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 PRODH2Q9UF12 536 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ADAM30Q9UKF2 790 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 M0R233 179 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 GMDSO60547 372 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 GATBO75879 557 aaKnown RBP9.68□□□□□ -0.86
TPM3-212ENST00000368533 IGKV3-11P04433 115 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 LPLP06858 475 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 CLUP10909 449 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ZP3P21754 424 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 FGF9P31371 208 aaPredicted RBP9.68□□□□□ -0.86
TPM3-212ENST00000368533 ZNF169Q14929 603 aaPredicted RBP9.68□□□□□ -0.86
TPM3-212ENST00000368533 TFAP2EQ6VUC0 442 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 SLC29A4Q7RTT9 530 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ANKRD37Q7Z713 158 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 FTMTQ8N4E7 242 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 C10orf53Q8N6V4 93 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 SAMD12Q8N8I0 201 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 OR51L1Q8NGJ5 315 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 FGF11Q92914 225 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 WWTR1Q9GZV5 400 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 CHRNA10Q9GZZ6 450 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ANKRD19PQ9H560 264 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ESRP2Q9H6T0 727 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms