RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ADRA2AP08913 450 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 SLC6A2P23975 617 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 IL2RGP31785 369 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 CDH12P55289 794 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 NCALDP61601 193 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 SRSF2Q01130 221 aaKnown RBP13.81□□□□□ -0.2
CKS1B-202ENST00000368436 PUDPQ08623 228 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 PMS2P3Q13401 168 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 MSMPQ1L6U9 139 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 GSG1Q2KHT4 349 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 SWT1Q5T5J6 900 aaKnown RBP13.81□□□□□ -0.2
CKS1B-202ENST00000368436 LINC00114Q6XXX2 140 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 ZNF813Q6ZN06 617 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 PXKQ7Z7A4 578 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 MRPL24Q96A35 216 aaKnown RBP13.81□□□□□ -0.2
CKS1B-202ENST00000368436 MS4A3Q96HJ5 214 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 ZNF607Q96SK3 696 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 DENND2DQ9H6A0 471 aaPredicted RBP13.81□□□□□ -0.2
CKS1B-202ENST00000368436 DYNLRB1Q9NP97 96 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 B3GAT2Q9NPZ5 323 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 ZNF224Q9NZL3 707 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 CORO2BQ9UQ03 480 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 POFUT2Q9Y2G5 429 aa13.81□□□□□ -0.2
CKS1B-202ENST00000368436 ZNF726A6NNF4 738 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 EVPLLA8MZ36 301 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 LRRN3E7EW58 273 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 CD79AP11912 226 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 APEX1P27695 318 aaKnown RBP13.8□□□□□ -0.2
CKS1B-202ENST00000368436 GLRXP35754 106 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 ATP4BP51164 291 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 AQP5P55064 265 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 PIGFQ07326 219 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 CAMK2DQ13557 499 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 BEND6Q5SZJ8 279 aaPredicted RBP13.8□□□□□ -0.2
CKS1B-202ENST00000368436 DLEU7Q6UYE1 221 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 RANBP3LQ86VV4 465 aaPredicted RBP13.8□□□□□ -0.2
CKS1B-202ENST00000368436 SNX32Q86XE0 403 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 ARMC8Q8IUR7 673 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 LINC01356Q8N9X3 169 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 HIPK4Q8NE63 616 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 RNF217Q8TC41 542 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 MRPL37Q9BZE1 423 aaKnown RBP13.8□□□□□ -0.2
CKS1B-202ENST00000368436 SLCO1B3Q9NPD5 702 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 SPEF1Q9Y4P9 236 aa13.8□□□□□ -0.2
CKS1B-202ENST00000368436 SYNGR3O43761 229 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 FMO6PO60774 539 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 MT-ATP6P00846 226 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 IFNGR1P15260 489 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 AQP1P29972 269 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 CDH15P55291 814 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 PCBP3P57721 371 aaKnown RBP13.79□□□□□ -0.2
CKS1B-202ENST00000368436 TRIP10Q15642 601 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 FXNQ16595 210 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 TRMT5Q32P41 509 aaKnown RBP13.79□□□□□ -0.2
CKS1B-202ENST00000368436 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 ZNF613Q6PF04 617 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 UGT2A3Q6UWM9 527 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 OR6N1Q8NGY5 312 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 SNX18Q96RF0 628 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 FOXB1Q99853 325 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 CPPED1Q9BRF8 314 aaPredicted RBP13.79□□□□□ -0.2
CKS1B-202ENST00000368436 ULBP2Q9BZM5 246 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 TPK1Q9H3S4 243 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 TMEFF2Q9UIK5 374 aaPredicted RBP13.79□□□□□ -0.2
CKS1B-202ENST00000368436 SLC13A4Q9UKG4 626 aa13.79□□□□□ -0.2
CKS1B-202ENST00000368436 LYNX1G3V0Z9 82 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 M0R233 179 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 ERLIN1O75477 346 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 LYNX1P0DP58 116 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 B4GALT1P15291 398 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 PTDSS1P48651 473 aaKnown RBP13.78□□□□□ -0.2
CKS1B-202ENST00000368436 RAB1AP62820 205 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 AGKQ53H12 422 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 ELFN2Q5R3F8 820 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 AGBL2Q5U5Z8 902 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 PTOV1Q86YD1 416 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 C10orf53Q8N6V4 93 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 OR5J2Q8NH18 312 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 LRRC8CQ8TDW0 803 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 TMEM54Q969K7 222 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 MCHR1Q99705 422 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 ARHGDIGQ99819 225 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 MS4A5Q9H3V2 200 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 REV1Q9UBZ9 1251 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.78□□□□□ -0.2
CKS1B-202ENST00000368436 FBXL3Q9UKT7 428 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 ANGPT4Q9Y264 503 aa13.78□□□□□ -0.2
CKS1B-202ENST00000368436 CHP2O43745 196 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 UBL3O95164 117 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 C8BP07358 591 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 AHCYP23526 432 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 GIPRP48546 466 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 CSNK1A1P48729 337 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 BIDP55957 195 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 ZP4Q12836 540 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 NPTX1Q15818 432 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 DUSP7Q16829 419 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 LIPNQ5VXI9 398 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 WDR88Q6ZMY6 472 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 PIWIL3Q7Z3Z3 882 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms