RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 OR1Q1Q15612 314 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 PHF19Q5T6S3 580 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 ZNF626Q68DY1 528 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 FAAH2Q6GMR7 532 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 B3GLCTQ6Y288 498 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 C3P1Q6ZMU1 363 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 HSD17B13Q7Z5P4 300 aaPredicted RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 MEX3DQ86XN8 651 aaKnown RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 GRAMD2AQ8IUY3 354 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 OR4N4Q8N0Y3 316 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 FTMTQ8N4E7 242 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 C2orf73Q8N5S3 287 aaPredicted RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 EIF4E3Q8N5X7 224 aaKnown RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 OR2L3Q8NG85 312 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 OR2T35Q8NGX2 323 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 ZDHHC1Q8WTX9 485 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 HOXB13Q92826 284 aaPredicted RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 GHSRQ92847 366 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 ZG16BQ96DA0 208 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 INSM2Q96T92 566 aaPredicted RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 SDF2Q99470 211 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 NUDT22Q9BRQ3 303 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 ZNF426Q9BUY5 554 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 GSDMCQ9BYG8 508 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 FAM117AQ9C073 453 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 KLHL31Q9H511 634 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 KLHL1Q9NR64 748 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 PHPT1Q9NRX4 125 aaPredicted RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 MOSPD1Q9UJG1 213 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 ING1Q9UK53 422 aaPredicted RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 C19orf53Q9UNZ5 99 aaPredicted RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 SLC17A4Q9Y2C5 497 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 PCYT1BQ9Y5K3 369 aaPredicted RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 HEBP2Q9Y5Z4 205 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 A0A0G2JN53 185 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 A0A1B0GW55 424 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 ANKRD20A5PA0PJZ0 165 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 MFSD2BA6NFX1 497 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 HSPB2A8KAH6 182 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 E9PI62 339 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 TRIM77I1YAP6 450 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 J3QLW9 94 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 ACOT7O00154 380 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 AIPO00170 330 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 PPM1DO15297 605 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 AQP8O94778 261 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 HOXD4P09016 255 aaPredicted RBP10.5□□□□□ -0.73
USF1-201ENST00000368019 DUX4L2P0CJ85 424 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 DUX4L3P0CJ86 424 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 DUX4L4P0CJ87 422 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 DUX4L5P0CJ88 424 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 DUX4L6P0CJ89 424 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 DUX4L7P0CJ90 424 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 SMIM10L1P0DMW3 83 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 ZNF250P15622 560 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 ZNF19P17023 458 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 CERS1P27544 350 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 CFPP27918 469 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 HTR2AP28223 471 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 OR12D2P58182 307 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 RAB8AP61006 207 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 TSPAN5P62079 268 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 RPS15AP62244 130 aaKnown RBP10.5□□□□□ -0.73
USF1-201ENST00000368019 SSBP1Q04837 148 aaKnown RBP10.5□□□□□ -0.73
USF1-201ENST00000368019 TRA2AQ13595 282 aaKnown RBP eCLIP10.5□□□□□ -0.73
USF1-201ENST00000368019 CRMP1Q14194 572 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 MPPED2Q15777 294 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 HSPB2Q16082 182 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 TCTE1Q5JU00 501 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 TMEM164Q5U3C3 297 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 C18orf63Q68DL7 685 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 CDRT4Q8N9R6 151 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 SLC16A11Q8NCK7 471 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 C17orf47Q8NEP4 570 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 OR11G2Q8NGC1 345 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 LGALS14Q8TCE9 139 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 SCARB1Q8WTV0 552 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 PATE1Q8WXA2 126 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 THAP4Q8WY91 577 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 THRSPQ92748 146 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 CDS1Q92903 461 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 NKD1Q969G9 470 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 PMEPA1Q969W9 287 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 BPIFA2Q96DR5 249 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 SMIM10Q96HG1 83 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 C12orf66Q96MD2 445 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 TAAR9Q96RI9 348 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 SERINC2Q96SA4 455 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 CNN2Q99439 309 aaKnown RBP10.5□□□□□ -0.73
USF1-201ENST00000368019 ARPC5LQ9BPX5 153 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 REG4Q9BYZ8 158 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 TWSG1Q9GZX9 223 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 KIR3DX1Q9H7L2 352 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 TMEM27Q9HBJ8 222 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 ZNF224Q9NZL3 707 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 DUX4Q9UBX2 424 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 CYB5R1Q9UHQ9 305 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 LRRK2Q5S007 2527 aa10.5□□□□□ -0.73
USF1-201ENST00000368019 IGHV1OR21-1A0A087WYE8 117 aa10.49□□□□□ -0.73
USF1-201ENST00000368019 RHPN2P1A8MT19 583 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms