RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 LY6HO94772 140 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ASAH2BP0C7U1 165 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SLC25A16P16260 332 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CAMK2DQ13557 499 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 MDP1Q86V88 176 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 LRRC17Q8N6Y2 441 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 VANGL1Q8TAA9 524 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 RASSF5Q8WWW0 418 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 MPP4Q96JB8 637 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SORCS2Q96PQ0 1159 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TNFRSF13CQ96RJ3 184 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SLC19A3Q9BZV2 496 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZNF442Q9H7R0 627 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 NOX3Q9HBY0 568 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 MEPEQ9NQ76 525 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 MRGBPQ9NV56 204 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 FGFR1OP2Q9NVK5 253 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SLC7A7Q9UM01 511 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 USP22Q9UPT9 525 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CHD3Q12873 2000 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SEC14L2O76054 403 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CH25HO95992 272 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 IGFBP1P08833 259 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 OR4A8P0C604 315 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ADORA3P0DMS8 318 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZNF14P17017 642 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 THBS4P35443 961 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ARFIP2P53365 341 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 VLDLRP98155 873 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 IL1RL1Q01638 556 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CARD17Q5XLA6 110 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TTC33Q6PID6 262 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SLC46A3Q7Z3Q1 461 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 IL17RDQ8NFM7 739 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 OR6X1Q8NH79 312 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 FAM168AQ92567 244 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PROX1Q92786 737 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TMEM54Q969K7 222 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 DOK1Q99704 481 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SH3GL1Q99961 368 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 KCNS3Q9BQ31 491 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CCDC134Q9H6E4 229 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZNF229Q9UJW7 825 aa11.84□□□□□ -0.51
TNFRSF1A-202ENST00000366159 COL6A5A8TX70 2615 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 BBIP1A8MTZ0 92 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 IGF2P01344 180 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 HLA-HP01893 362 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 TP53P04637 393 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CSF3P09919 207 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 TSPAN19P0C672 248 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 TROVE2P10155 538 aaKnown RBP eCLIP11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ZNF35P13682 527 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 IFNGR1P15260 489 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 AHCYP23526 432 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PPOXP50336 477 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 IDH3GP51553 393 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 BIDP55957 195 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SNRPD2P62316 118 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 HIST3H3Q16695 136 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 REP15Q6BDI9 236 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 LRFN4Q6PJG9 635 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 HIPK1Q86Z02 1210 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 C10orf53Q8N6V4 93 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 C10orf82Q8WW14 230 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MDFIQ99750 246 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 FOXB1Q99853 325 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 DENND2DQ9H6A0 471 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 NANSQ9NR45 359 aa11.83□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ZNF726A6NNF4 738 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 C11orf98E9PRG8 122 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MRASO14807 208 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 NR4A1P22736 598 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MSMPQ1L6U9 139 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 C6orf52Q5T4I8 152 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ZNF813Q6ZN06 617 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SLC35D2Q76EJ3 337 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PIWIL3Q7Z3Z3 882 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CARM1Q86X55 608 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 NKAIN4Q8IVV8 208 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SLC26A7Q8TE54 656 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 LIPHQ8WWY8 451 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SLC25A44Q96H78 314 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SEPHS2Q99611 448 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ECSITQ9BQ95 431 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ULBP2Q9BZM5 246 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 POLR2J2Q9GZM3 115 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 POLR2J3Q9H1A7 115 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 B3GAT2Q9NPZ5 323 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 GLTPQ9NZD2 209 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SH3GLB1Q9Y371 365 aa11.82□□□□□ -0.52
TNFRSF1A-202ENST00000366159 LOC100653049A0A140TA62 436 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 A8MV72 311 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 NDUFS8O00217 210 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 KRT34O76011 436 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MT-ND1P03886 318 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PGA4P0DJD7 388 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PGA3P0DJD8 388 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 IGHV4-31P0DP07 118 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 B4GALT1P15291 398 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms