RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PDXPQ96GD0 296 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 OR10C1Q96KK4 312 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 WFIKKN1Q96NZ8 548 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 TPPP3Q9BW30 176 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 ULBP2Q9BZM5 246 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 FARSBQ9NSD9 589 aaKnown RBP2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 RNF14Q9UBS8 474 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 CD84Q9UIB8 345 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 COL5A1P20908 1838 aaPredicted RBP2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 MSH6P52701 1360 aa2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 RPAP1Q9BWH6 1393 aaPredicted RBP2.23□□□□□ -2.05
RNU4-28P-201ENST00000364739 FANCIQ9NVI1 1328 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 H0YHG0 523 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 RPL36A-HNRNPH2H7BZ11 118 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 KMOO15229 486 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 MED7O43513 233 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 TOM1O60784 492 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 SMPD2O60906 423 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 RCBTB2O95199 551 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 GYG1P46976 350 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 RAP1AP62834 184 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 SLC7A9P82251 487 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 CBX1P83916 185 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 DPYSL2Q16555 572 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 ZNF684Q5T5D7 378 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 PLA2G4DQ86XP0 818 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 RIMKLAQ8IXN7 391 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 UBALD2Q8IYN6 164 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 OR2T34Q8NGX1 318 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 ESR2Q92731 530 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 SMARCD2Q92925 531 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 SGK3Q96BR1 496 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 CXorf40BQ96DE9 158 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 MED8Q96G25 268 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 CHAC1Q9BUX1 264 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 SPNS1Q9H2V7 528 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 PACSIN2Q9UNF0 486 aaPredicted RBP2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 KIF3AQ9Y496 699 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 RFNGQ9Y644 331 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 YEATS2Q9ULM3 1422 aa2.22□□□□□ -2.05
RNU4-28P-201ENST00000364739 IGHV3-66A0A0C4DH42 116 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 A0A1B0GVI7 797 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 OR5B21A6NL26 309 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 K7EM74 188 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 K7EPI3 171 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 RAMP3O60896 148 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 UGT2B4P06133 528 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 RNASE2P10153 161 aaKnown RBP2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 RPA2P15927 270 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 PSMC3P17980 439 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 TCN2P20062 427 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 IRX3P78415 501 aaPredicted RBP2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 SYCNQ0VAF6 134 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 MESDQ14696 234 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 SF3A2Q15428 464 aaKnown RBP2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 PDK4Q16654 411 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 TPD52L1Q16890 204 aaPredicted RBP2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 COX19Q49B96 90 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 NADK2Q4G0N4 442 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 PRR9Q5T870 116 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 NEGR1Q7Z3B1 354 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 ZNF683Q8IZ20 524 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 STPG2Q8N412 459 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 SDR42E1Q8WUS8 393 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 NEURL3Q96EH8 262 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 MS4A4EQ96PG1 132 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 SLC38A2Q96QD8 506 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 YY1AP1Q9H869 796 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 C12orf10Q9HB07 376 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 UFSP2Q9NUQ7 469 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 PIPOXQ9P0Z9 390 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 SHANK1Q9Y566 2161 aa2.21□□□□□ -2.06
RNU4-28P-201ENST00000364739 ATP10AO60312 1499 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 A0A1B0GWJ7 208 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 ZNF233A6NK53 670 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 PRKAB2O43741 272 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 VAMP5O95183 116 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 MPZL1O95297 269 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 LINC00869P0C866 280 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 UBTFL1P0CB47 393 aaPredicted RBP2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 NCK1P16333 377 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 SLC2A5P22732 501 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 CCR1P32246 355 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 CD86P42081 329 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 NPBWR2P48146 333 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 ERVK-25P63136 954 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 SCRN3Q0VDG4 424 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 GANABQ14697 944 aaKnown RBP2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 PRSS8Q16651 343 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 HES5Q5TA89 166 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 RIPPLY2Q5TAB7 128 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 TMEM225Q6GV28 225 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 UTS2BQ765I0 119 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 STRADAQ7RTN6 431 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 KRTAP13-1Q8IUC0 172 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 TSSK3Q96PN8 268 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 LIN28AQ9H9Z2 209 aaKnown RBP2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 ADAP2Q9NPF8 381 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 POLE4Q9NR33 117 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 TMOD2Q9NZR1 351 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms