RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ZNF551Q7Z340 670 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 LRRTM1Q86UE6 522 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 OR6K3Q8NGY3 331 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 BRI3BPQ8WY22 251 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 RTP3Q9BQQ7 232 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ULBP2Q9BZM5 246 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ARNT2Q9HBZ2 717 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 KDM4EB2RXH2 506 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 TRIM77I1YAP6 450 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 COCHO43405 550 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 TCRBP04435 133 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ALPLP05186 524 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF90Q03938 601 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 SLC38A6Q8IZM9 456 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 CISD2Q8N5K1 135 aaKnown RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 CRLF2Q9HC73 371 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ENTPD2Q9Y5L3 495 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 A0A0G2JLL6 359 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 KIR2DS1A0A191URI9 304 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 KIR2DS4P43632 304 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 KIR2DS1Q14954 304 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 PSAPL1Q6NUJ1 521 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 PRRT2Q7Z6L0 340 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ANGPTL6Q8NI99 470 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 SLC39A13Q96H72 371 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 CXXC1Q9P0U4 656 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 MRPS28Q9Y2Q9 187 aaKnown RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 DCTN6O00399 190 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 NCR1O76036 304 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 DMWDQ09019 674 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF561Q8N587 486 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 UCK1Q9HA47 277 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 GABRQQ9UN88 632 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 AQP7O14520 342 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 SORBS2O94875 1100 aaKnown RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 TGM1P22735 817 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 SLC11A1P49279 550 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 KCNG2Q9UJ96 466 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 LOC102723971A0A1B0GUV8 181 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 PDE7AQ13946 482 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 LIPHQ8WWY8 451 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ELOVL3Q9HB03 270 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 MED9Q9NWA0 146 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF629Q9UEG4 869 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 KNDC1Q76NI1 1749 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF732B4DXR9 585 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 NXPH2O95156 264 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 BMP1P13497 986 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF93P35789 620 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 BARHL1Q9BZE3 327 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 RIMS4Q9H426 269 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 SRPK3Q9UPE1 567 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 A0A1B0GUL6 1792 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF727A8MUV8 499 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 CR2P20023 1033 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 G0S2P27469 103 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 LBHQ53QV2 105 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 NXNL2Q5VZ03 156 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 CTDSP1Q9GZU7 261 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 FBXO34Q9NWN3 711 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 AJAP1Q9UKB5 411 aaPredicted RBP8.64□□□□□ -1.03
VPS13A-203ENST00000360280 TMEM221A6NGB7 291 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 FGF18O76093 207 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 SOD2P04179 222 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 SIRPAP78324 504 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF85Q03923 595 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 MISPQ8IVT2 679 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 BLNKQ8WV28 456 aa8.64□□□□□ -1.03
VPS13A-203ENST00000360280 PHLPP1O60346 1717 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 RGPD2P0DJD1 1756 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 OR5K3A6NET4 321 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 IGLON5A6NGN9 336 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 SLC9B1P1A6NJY1 282 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 C1QBP02746 253 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 SLC16A14Q7RTX9 510 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 CDC20BQ86Y33 519 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 MTMR14Q8NCE2 650 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 OR51A2Q8NGJ7 313 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 NOX4Q9NPH5 578 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 MRPL33O75394 65 aaKnown RBP8.63□□□□□ -1.03
VPS13A-203ENST00000360280 KIR2DS3Q14952 304 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 CD99L2Q8TCZ2 262 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 KCNJ15Q99712 375 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 GPR174Q9BXC1 333 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 C5AR2Q9P296 337 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 COL14A1Q05707 1796 aaKnown RBP8.63□□□□□ -1.03
VPS13A-203ENST00000360280 C4AP0C0L4 1744 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 C4BP0C0L5 1744 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 A6NIN4 97 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 NME2P1O60361 137 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 SRMP19623 302 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 RBPJQ06330 500 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 SPACA1Q9HBV2 294 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 A0A0U1RQF3 1178 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 HMGN2P05204 90 aaKnown RBP8.63□□□□□ -1.03
VPS13A-203ENST00000360280 CFHP08603 1231 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 HNRNPA1P09651 372 aaKnown RBP eCLIP8.63□□□□□ -1.03
VPS13A-203ENST00000360280 KIAA1024LP59773 190 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 ILKQ13418 452 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 CLEC9AQ6UXN8 241 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms