RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ZNF264O43296 627 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 GRPP07492 148 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 HOXA11P31270 313 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-203ENST00000359759 COX20Q5RI15 118 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM64Q6YI46 380 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 C15orf39Q6ZRI6 1047 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 OR51A4Q8NGJ6 313 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 OR51A2Q8NGJ7 313 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 IL23AQ9NPF7 189 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF750Q32MQ0 723 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 TMEM31Q5JXX7 168 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 NKAIN2Q5VXU1 208 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 PSORS1C1Q9UIG5 152 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 UBR1Q8IWV7 1749 aa14.85□□□□□ -0.03
COL18A1-203ENST00000359759 LRIT2A6NDA9 550 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 CLLU1OSQ5K130 101 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF468Q5VIY5 522 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-203ENST00000359759 OLIG3Q7RTU3 272 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 DPPA2Q7Z7J5 298 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 OR11L1Q8NGX0 322 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 ABHD6Q9BV23 337 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 WDR76Q9H967 626 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 MED1Q15648 1581 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-203ENST00000359759 DDAH2O95865 285 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 SOWAHCQ53LP3 525 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-203ENST00000359759 MUCL1Q96DR8 90 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 NECAP2Q9NVZ3 263 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 CLEC2DQ9UHP7 191 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 HPNP05981 417 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 S100A7P31151 101 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 PMPCAQ10713 525 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 RAB33AQ14088 237 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 HAGHQ16775 308 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 PXDC1Q5TGL8 231 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 CATSPERDQ86XM0 798 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 OR5M1Q8NGP8 315 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 SLC38A5Q8WUX1 472 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 RASD2Q96D21 266 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 AMBRA1Q9C0C7 1298 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 FBXO8Q9NRD0 319 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 RNF186Q9NXI6 227 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 BCAT2O15382 392 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-203ENST00000359759 ZFAND5O76080 213 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 C1SP09871 688 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 SLC6A11P48066 632 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 GIPRP48546 466 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 DUSP6Q16828 381 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 GLYATL3Q5SZD4 288 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 SYT13Q7L8C5 426 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 ZNRF4Q8WWF5 429 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 C20orf27Q9GZN8 174 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 C12orf49Q9H741 205 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 TAS2R5Q9NYW4 299 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 CRYM-AS1A6NIL9 109 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 B4GALT3O60512 393 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 MBOAT2Q6ZWT7 520 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 CLEC14AQ86T13 490 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF296Q8WUU4 475 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-203ENST00000359759 EMC7Q9NPA0 242 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 HEYLQ9NQ87 328 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-203ENST00000359759 RBFOX1Q9NWB1 397 aaKnown RBP14.84□□□□□ -0.03
COL18A1-203ENST00000359759 LRIT1Q9P2V4 623 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 CGGBP1Q9UFW8 167 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-203ENST00000359759 CD207Q9UJ71 328 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 SSUH2Q9Y2M2 353 aa14.84□□□□□ -0.03
COL18A1-203ENST00000359759 TOR2AQ5JU69 321 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 C1orf87Q8N0U7 546 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 BANF2Q9H503 90 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 TREX1Q9NSU2 369 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 PIGLQ9Y2B2 252 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 DCTN6O00399 190 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 ZNF425Q6IV72 752 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 NECTIN4Q96NY8 510 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 NIPSNAP1Q9BPW8 284 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 UQCC2Q9BRT2 126 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 WIF1Q9Y5W5 379 aa14.83□□□□□ -0.03
COL18A1-203ENST00000359759 ETV1P50549 477 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 ALKBH1Q13686 389 aaKnown RBP14.83□□□□□ -0.04
COL18A1-203ENST00000359759 RAB35Q15286 201 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 EMC10Q5UCC4 262 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 AAED1Q7RTV5 226 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 RLN3Q8WXF3 142 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 CPPED1Q9BRF8 314 aaPredicted RBP14.83□□□□□ -0.04
COL18A1-203ENST00000359759 MED9Q9NWA0 146 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 SOCS7O14512 581 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL18A1-203ENST00000359759 WDR83Q9BRX9 315 aaKnown RBP14.83□□□□□ -0.04
COL18A1-203ENST00000359759 NAGAP17050 411 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 MTNR1BP49286 362 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 ZNF266Q14584 549 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 ACKR1Q16570 336 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 WDR5BQ86VZ2 330 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 PFN4Q8NHR9 129 aa14.83□□□□□ -0.04
COL18A1-203ENST00000359759 ZC3H12DA2A288 527 aaKnown RBP14.82□□□□□ -0.04
COL18A1-203ENST00000359759 FOXE1O00358 373 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-203ENST00000359759 ADAM23O75077 832 aa14.82□□□□□ -0.04
COL18A1-203ENST00000359759 TAS1R1Q7RTX1 841 aa14.82□□□□□ -0.04
COL18A1-203ENST00000359759 DUSP13Q9UII6 198 aa14.82□□□□□ -0.04
COL18A1-203ENST00000359759 AQP7P3A6NL99 342 aa14.82□□□□□ -0.04
COL18A1-203ENST00000359759 GCAP28676 217 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms