RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CD276Q5ZPR3 534 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 CREB3L2Q70SY1 520 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 GPR155Q7Z3F1 870 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 SUMF2Q8NBJ7 301 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 ELSPBP1Q96BH3 223 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 OR5M11Q96RB7 305 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 DUSP21Q9H596 190 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 SCPEP1Q9HB40 452 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 FGF21Q9NSA1 209 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 KIAA1217Q5T5P2 1943 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 LOC100289279A0A1B0GTE1 492 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 TEX51A0A1B0GUA7 166 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM200CA6NKL6 621 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 LILRB5O75023 590 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 KCNK2O95069 426 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 CALCBP10092 127 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 SHC1P29353 583 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 HTR5AP47898 357 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 PAPD4Q6PIY7 484 aaKnown RBP10.84□□□□□ -0.67
COL9A1-202ENST00000357250 ADGRE4PQ86SQ3 457 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 ZDHHC5Q9C0B5 715 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 METTL17Q9H7H0 456 aaPredicted RBP10.84□□□□□ -0.67
COL9A1-202ENST00000357250 OSGIN1Q9UJX0 560 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 MRPS28Q9Y2Q9 187 aaKnown RBP10.84□□□□□ -0.67
COL9A1-202ENST00000357250 CABIN1Q9Y6J0 2220 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.84□□□□□ -0.67
COL9A1-202ENST00000357250 ANKRD33BA6NCL7 494 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 K7EPK0 472 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 CHRNB1P11230 501 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 MTCP1P56278 107 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 NKX6-1P78426 367 aaPredicted RBP10.84□□□□□ -0.67
COL9A1-202ENST00000357250 MC2RQ01718 297 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 OPCMLQ14982 345 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 C14orf28Q4W4Y0 310 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 LCN10Q6JVE6 187 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 NPSR1Q6W5P4 371 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 DPY19L4Q7Z388 723 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 FAM71E2Q8N5Q1 922 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 MS4A6EQ96DS6 147 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 NMNAT3Q96T66 252 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 NXF5Q9H1B4 397 aaKnown RBP10.84□□□□□ -0.67
COL9A1-202ENST00000357250 ACER3Q9NUN7 267 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 DAPP1Q9UN19 280 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 LINC01553A4QN01 128 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF254O75437 659 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 VAMP5O95183 116 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 EPHA1P21709 976 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF133P52736 654 aaPredicted RBP10.84□□□□□ -0.67
COL9A1-202ENST00000357250 EXT1Q16394 746 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 STEAP1BQ6NZ63 245 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF836Q6ZNA1 936 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 OR13C9Q8NGT0 318 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 PIGCQ92535 297 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 TEX37Q96LM6 180 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 SLC19A3Q9BZV2 496 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 NGBQ9NPG2 151 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 PPT2Q9UMR5 302 aa10.84□□□□□ -0.67
COL9A1-202ENST00000357250 WDPCPO95876 746 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 ACHEP22303 614 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 EVI2BP34910 448 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 PIGAP37287 484 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 LIPAP38571 399 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 LIM2P55344 173 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 EEF1A2Q05639 463 aaKnown RBP10.83□□□□□ -0.68
COL9A1-202ENST00000357250 ACSM1Q08AH1 577 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 IL20RBQ6UXL0 311 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 SLC51BQ86UW2 128 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 SLC16A11Q8NCK7 471 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 TMEM255BQ8WV15 326 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 MRPL38Q96DV4 380 aaKnown RBP10.83□□□□□ -0.68
COL9A1-202ENST00000357250 ADPRMQ3LIE5 342 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 SLC35D2Q76EJ3 337 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 LYSMD2Q8IV50 215 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 NLGN4YQ8NFZ3 816 aaPredicted RBP10.83□□□□□ -0.68
COL9A1-202ENST00000357250 SLC25A46Q96AG3 418 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 QRSL1Q9H0R6 528 aaKnown RBP10.83□□□□□ -0.68
COL9A1-202ENST00000357250 RPS10P5Q9NQ39 176 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 FBXO8Q9NRD0 319 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 TAF1LQ8IZX4 1826 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 A0A1B0GX78 115 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 A0A1W2PPV4 95 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF195O14628 629 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 MSTNO14793 375 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 SIGLEC6O43699 453 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 OLFM2O95897 454 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 SMIM18P0DKX4 95 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 APEX1P27695 318 aaKnown RBP10.83□□□□□ -0.68
COL9A1-202ENST00000357250 APOBEC1P41238 236 aaKnown RBP10.83□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF136P52737 540 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 PLA2G7Q13093 441 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 GALEQ14376 348 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 CDKN3Q16667 212 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 SYT14P1Q58G82 188 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 RDH10Q8IZV5 341 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 SYS1Q8N2H4 156 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 EDAQ92838 391 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 TAAR8Q969N4 342 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 NKX3-1Q99801 234 aaPredicted RBP10.83□□□□□ -0.68
COL9A1-202ENST00000357250 UTP23Q9BRU9 249 aaKnown RBP10.83□□□□□ -0.68
COL9A1-202ENST00000357250 SLC6A17Q9H1V8 727 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms