RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 TOE1Q96GM8 510 aaKnown RBP12.96□□□□□ -0.33
SREBF1-202ENST00000355815 GAS2L1Q99501 681 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-202ENST00000355815 GABARAPL1Q9H0R8 117 aa12.96□□□□□ -0.33
SREBF1-202ENST00000355815 TRDV1A0A1B0GX56 115 aa12.96□□□□□ -0.34
SREBF1-202ENST00000355815 SCDO00767 359 aa12.96□□□□□ -0.34
SREBF1-202ENST00000355815 F13BP05160 661 aa12.96□□□□□ -0.34
SREBF1-202ENST00000355815 DEFB133Q30KQ1 61 aa12.96□□□□□ -0.34
SREBF1-202ENST00000355815 OR51S1Q8NGJ8 323 aa12.96□□□□□ -0.34
SREBF1-202ENST00000355815 MOAP1Q96BY2 351 aa12.96□□□□□ -0.34
SREBF1-202ENST00000355815 HCAR1Q9BXC0 346 aa12.96□□□□□ -0.34
SREBF1-202ENST00000355815 SIDT1Q9NXL6 827 aaKnown RBP12.96□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF850A8MQ14 1090 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 GPR171O14626 319 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 LILRB3O75022 631 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 SNAPC5O75971 98 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 LGI1O95970 557 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 EIF4EP06730 217 aaKnown RBP12.95□□□□□ -0.34
SREBF1-202ENST00000355815 GLI4P10075 376 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 DRD3P35462 400 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 CLDN20P56880 219 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 DPTQ07507 201 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 RBMS2Q15434 407 aaKnown RBP12.95□□□□□ -0.34
SREBF1-202ENST00000355815 OR7A5Q15622 319 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 MLF2Q15773 248 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-202ENST00000355815 BCL2A1Q16548 175 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 YIF1BQ5BJH7 314 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 TIGD3Q6B0B8 471 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 KCTD18Q6PI47 426 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-202ENST00000355815 NRSN2Q9GZP1 204 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 UBQLN3Q9H347 655 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 HINT3Q9NQE9 182 aaKnown RBP12.95□□□□□ -0.34
SREBF1-202ENST00000355815 LOC285556D6RIA3 1793 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 K7EPK0 472 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 ERVH48-1M5A8F1 160 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 RPS27P42677 84 aaKnown RBP12.95□□□□□ -0.34
SREBF1-202ENST00000355815 BLKP51451 505 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 ADPRHP54922 357 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 LRRTM1Q86UE6 522 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 GLB1L2Q8IW92 636 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 FAM71E2Q8N5Q1 922 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 OR13H1Q8NG92 308 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 OR13C3Q8NGS6 347 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 FAM3CQ92520 227 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 PITX2Q99697 317 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 ACOXLQ9NUZ1 547 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 FBXO34Q9NWN3 711 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
SREBF1-202ENST00000355815 CA14Q9ULX7 337 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF318Q5VUA4 2279 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 CDK2AP1O14519 115 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 IFNA2P01563 188 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 H2BFMP0C1H6 154 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 CD80P33681 288 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-202ENST00000355815 HERV-K104P61576 105 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 RPS27AP62979 156 aaKnown RBP12.95□□□□□ -0.34
SREBF1-202ENST00000355815 UBA52P62987 128 aaKnown RBP12.95□□□□□ -0.34
SREBF1-202ENST00000355815 TFF2Q03403 129 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 GNMTQ14749 295 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 TMEM196Q5HYL7 178 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 SLC35D2Q76EJ3 337 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 OR8D4Q8NGM9 314 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 HCAR2Q8TDS4 363 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF566Q969W8 418 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 UPRTQ96BW1 309 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 ADOQ96SZ5 270 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 ORAI3Q9BRQ5 295 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 CDCA4Q9BXL8 241 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 ABRACLQ9P1F3 81 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 MED12Q93074 2177 aa12.95□□□□□ -0.34
SREBF1-202ENST00000355815 TMEM72A0PK05 275 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 CASC3O15234 703 aaKnown RBP12.94□□□□□ -0.34
SREBF1-202ENST00000355815 ATP1B1P05026 303 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF322Q6U7Q0 402 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-202ENST00000355815 ABI3BPQ7Z7G0 1075 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 TMEM106AQ96A25 262 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 RNF170Q96K19 258 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 SLX1AQ9BQ83 275 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 TCEAL7Q9BRU2 100 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 HDAC8Q9BY41 377 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 LRFN1Q9P244 771 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 FITM1A5D6W6 292 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 NPIPA5E9PKD4 350 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 PAPLNO95428 1278 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 HBQ1P09105 142 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 CSF1P09603 554 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 OMGP23515 440 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 BTG1P62324 171 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 CSNK2A1P68400 391 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-202ENST00000355815 DECR1Q16698 335 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 CDRT4Q8N9R6 151 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 ZNF511Q8NB15 262 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 CSNK2A3Q8NEV1 391 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 RSC1A1Q92681 617 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 TIMM29Q9BSF4 260 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 ULBP3Q9BZM4 244 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 LIN7BQ9HAP6 207 aa12.94□□□□□ -0.34
SREBF1-202ENST00000355815 NPIPA1Q9UND3 350 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms