RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 BEST3Q8N1M1 668 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 POGLUT1Q8NBL1 392 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 TMEM178AQ8NBL3 297 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 OR9Q2Q8NGE9 314 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 RHOXF1Q8NHV9 184 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 ZNF420Q8TAQ5 688 aaPredicted RBP6.25□□□□□ -1.41
VPS13A-201ENST00000355766 FAM57AQ8TBR7 257 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 TEX47Q8TBZ9 253 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 ELP5Q8TE02 316 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 TMEM239Q8WW34 195 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 LIPHQ8WWY8 451 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 TMCO6Q96DC7 493 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 DTNBP1Q96EV8 351 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 SCMH1Q96GD3 660 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 SLC38A2Q96QD8 506 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 GAL3ST4Q96RP7 486 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 NIPSNAP1Q9BPW8 284 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 HES7Q9BYE0 225 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 RACGAP1Q9H0H5 632 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 KCNJ16Q9NPI9 418 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 KLHL1Q9NR64 748 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 RLIMQ9NVW2 624 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 IL20Q9NYY1 176 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 EDARQ9UNE0 448 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 RNF6Q9Y252 685 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 MED31Q9Y3C7 131 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 NBEAL1Q6ZS30 2694 aa6.25□□□□□ -1.41
VPS13A-201ENST00000355766 DOCK10Q96BY6 2186 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 CPAMD8Q8IZJ3 1885 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 A0A087WUJ7 227 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 A0A1B0GWA3 101 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 EFCAB10A6NFE3 127 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 CPSF4LA6NMK7 179 aaKnown RBP6.24□□□□□ -1.41
VPS13A-201ENST00000355766 FADS1O60427 444 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 HCN1O60741 890 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 RCBTB2O95199 551 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 HMGN1P05114 100 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 TFAP2AP05549 437 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 TPOP07202 933 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 ZNF24P17028 368 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 FKBP2P26885 142 aaKnown RBP6.24□□□□□ -1.41
VPS13A-201ENST00000355766 PCSK6P29122 969 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 EVI2BP34910 448 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 SLC1A3P43003 542 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 YAP1P46937 504 aaKnown RBP6.24□□□□□ -1.41
VPS13A-201ENST00000355766 GTF2A1P52655 376 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-201ENST00000355766 SLC35A2P78381 396 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 IL5RAQ01344 420 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 PTGES3Q15185 160 aaKnown RBP6.24□□□□□ -1.41
VPS13A-201ENST00000355766 OR1C1Q15619 314 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 TBCEQ15813 527 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-201ENST00000355766 DEFB113Q30KQ7 82 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 NRN1LQ496H8 165 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 ALG10BQ5I7T1 473 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 ARMC4Q5T2S8 1044 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 TMEM211Q6ICI0 200 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 TUBA3EQ6PEY2 450 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 Q6ZSN1 163 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 LANCL3Q6ZV70 420 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 SPATC1Q76KD6 591 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 PRSS48Q7RTY5 328 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 GALNT5Q7Z7M9 940 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 NRMQ8IXM6 262 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 ENTHD1Q8IYW4 607 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 CYP4Z2PQ8N1L4 340 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 FAM98AQ8NCA5 519 aaKnown RBP6.24□□□□□ -1.41
VPS13A-201ENST00000355766 OR2T33Q8NG76 320 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 OR4N2Q8NGD1 307 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 OR52L1Q8NGH7 329 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 OR4C3Q8NH37 302 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 OR6S1Q8NH40 331 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 FAM81AQ8TBF8 368 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 ST8SIA1Q92185 356 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 MYDGFQ969H8 173 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 OMA1Q96E52 524 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 IMMP1LQ96LU5 166 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 SIGLEC12Q96PQ1 595 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 SIGLEC11Q96RL6 698 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 GPX7Q96SL4 187 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-201ENST00000355766 PRSS27Q9BQR3 290 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 WFDC6Q9BQY6 131 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 TBL1XR1Q9BZK7 514 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 FN3KQ9H479 309 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 SDHAF3Q9NRP4 125 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 RASSF1Q9NS23 344 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 FKBP14Q9NWM8 211 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 RPS6KB2Q9UBS0 482 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 ZNF223Q9UK11 482 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-201ENST00000355766 SLC7A7Q9UM01 511 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 ICAM5Q9UMF0 924 aa6.24□□□□□ -1.41
VPS13A-201ENST00000355766 ABCA4P78363 2273 aa6.23□□□□□ -1.41
VPS13A-201ENST00000355766 ATRQ13535 2644 aa6.23□□□□□ -1.41
VPS13A-201ENST00000355766 TRBV11-1A0A0K0K1C0 115 aa6.23□□□□□ -1.41
VPS13A-201ENST00000355766 CLCA1A8K7I4 914 aa6.23□□□□□ -1.41
VPS13A-201ENST00000355766 H3BN98 237 aa6.23□□□□□ -1.41
VPS13A-201ENST00000355766 TP53I11O14683 189 aa6.23□□□□□ -1.41
VPS13A-201ENST00000355766 IDH3BO43837 385 aa6.23□□□□□ -1.41
VPS13A-201ENST00000355766 WBP4O75554 376 aaKnown RBP6.23□□□□□ -1.41
VPS13A-201ENST00000355766 REM1O75628 298 aa6.23□□□□□ -1.41
VPS13A-201ENST00000355766 CLIC3O95833 236 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms