RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 DGCR2P98153 550 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 RAB40BQ12829 278 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 P2RY14Q15391 338 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 ZNF791Q3KP31 576 aaPredicted RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 PDZK1Q5T2W1 519 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 C6orf163Q5TEZ5 329 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 PRR14LQ5THK1 2151 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 FAM69BQ5VUD6 431 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TRIM40Q6P9F5 258 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 ZNF730Q6ZMV8 503 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 AHSA2Q719I0 299 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 RD3Q7Z3Z2 195 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 GPR141Q7Z602 305 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 LAX1Q8IWV1 398 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 RNF113BQ8IZP6 322 aaKnown RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 SDR16C5Q8N3Y7 309 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TMEM105Q8N8V8 129 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 WDSUB1Q8N9V3 476 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 SLC37A3Q8NCC5 494 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 ZBTB44Q8NCP5 570 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 OR4D9Q8NGE8 314 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 OR5J2Q8NH18 312 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 OR52N1Q8NH53 320 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 OR52P1PQ8NH57 321 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 VANGL1Q8TAA9 524 aaPredicted RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 Q8TCH9 128 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 ST8SIA2Q92186 375 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TSLPQ969D9 159 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TAAR8Q969N4 342 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 MCHR2Q969V1 340 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 IMMP1LQ96LU5 166 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 NEDD4LQ96PU5 975 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 CTRCQ99895 268 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 VN1R1Q9GZP7 353 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 SLC25A32Q9H2D1 315 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 VCXQ9H320 206 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 RIBC2Q9H4K1 309 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TRIM45Q9H8W5 580 aaPredicted RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 C12orf10Q9HB07 376 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 AMBNQ9NP70 447 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 HEYLQ9NQ87 328 aaPredicted RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 DNAJC27Q9NZQ0 273 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 CA14Q9ULX7 337 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 GMPPBQ9Y5P6 360 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TENM4Q6N022 2769 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TBC1D3DA0A087WVF3 549 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TBC1D3IA0A087WXS9 549 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TBC1D3EA0A087X179 549 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 A0A1B0GWA3 101 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TRDV1A0A1B0GX56 115 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TLCD2A6NGC4 264 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 ANKDD1BA6NHY2 528 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 C2orf74A8MZ97 194 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 B5MCH6 92 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TBC1D3LB9A6J9 549 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 CDX4O14627 284 aaPredicted RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 ARPC3O15145 178 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 MBPP02686 304 aaPredicted RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 ITGA5P08648 1049 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 CSF1P09603 554 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TBC1D3HP0C7X1 549 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 HIST1H1CP16403 213 aaKnown RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 CD36P16671 472 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 BMP7P18075 431 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 CCNA2P20248 432 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 CXCR2P25025 360 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 CMPK1P30085 196 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 NUDT1P36639 197 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 KIR3DL2P43630 455 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 GPR4P46093 362 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 HCCSP53701 268 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 OR1D5P58170 312 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 HHEXQ03014 270 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 RAB32Q13637 225 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 LARS2Q15031 903 aaKnown RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 ZNF74Q16587 644 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 C14orf28Q4W4Y0 310 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 AWAT1Q58HT5 328 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 FAM27D1Q5T7N8 215 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TBC1D3CQ6IPX1 549 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 B3GLCTQ6Y288 498 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 FAM92BQ6ZTR7 304 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 LANCL3Q6ZV70 420 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 PAGE2Q7Z2X7 111 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 NRMQ8IXM6 262 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 TBC1D3Q8IZP1 549 aaPredicted RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 OR4K14Q8NGD5 310 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 OR8J1Q8NGP2 316 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 OR13C2Q8NGS9 318 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 OR6F1Q8NGZ6 308 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 OR14A16Q8NHC5 309 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 MOSPD2Q8NHP6 518 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 MAFAQ8NHW3 353 aaPredicted RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 FAM81AQ8TBF8 368 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 GPR119Q8TDV5 335 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 ST7LQ8TDW4 575 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 ADAMTS18Q8TE60 1221 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 PSMF1Q92530 271 aa2.06□□□□□ -2.08
VPS54-202ENST00000354504 KTI12Q96EK9 354 aaPredicted RBP2.06□□□□□ -2.08
VPS54-202ENST00000354504 PELI1Q96FA3 418 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms