RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 HOXB13Q92826 284 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 NAT6Q93015 286 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SMIM19Q96E16 107 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ZMYND19Q96E35 227 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 PELI1Q96FA3 418 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 RBM18Q96H35 190 aaKnown RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 DERL3Q96Q80 235 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 OR14A2Q96R54 314 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CLEC4MQ9H2X3 399 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 HAO2Q9NYQ3 351 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SCP2D1Q9UJQ7 156 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SPATA2Q9UM82 520 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CAMK2AQ9UQM7 478 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ERVK-19Q9WJR5 959 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 MED31Q9Y3C7 131 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 NPTNQ9Y639 398 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 COL5A1P20908 1838 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 A0A1B0GX78 115 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 GSTZ1O43708 216 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 OR10H2O60403 315 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 IFNA7P01567 189 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 DBIP07108 87 aaKnown RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 GDI2P50395 445 aaKnown RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 HSD17B7P56937 341 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SPEM2Q0P670 501 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 DYRK1AQ13627 763 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 MFSD13AQ14CX5 517 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CDK5R1Q15078 307 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SFRP4Q6FHJ7 346 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 RHBDD2Q6NTF9 364 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 FAM199XQ6PEV8 388 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 Q6ZTK2 550 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SAMD14Q8IZD0 417 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF615Q8N8J6 731 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 OR51L1Q8NGJ5 315 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 C16orf52Q8NHV5 167 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 LGALS14Q8TCE9 139 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ORAI1Q96D31 301 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 TNFRSF13CQ96RJ3 184 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 PDCD1LG2Q9BQ51 273 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF436Q9C0F3 470 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 VN1R1Q9GZP7 353 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 PCDHGA9Q9Y5G4 932 aaKnown RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 MPDZO75970 2070 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 IGHV3-20A0A0C4DH32 117 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 A0A1W2PNU3 283 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 OGG1O15527 345 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 PEX14O75381 377 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 OR7A10O76100 309 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 LDOC1O95751 146 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 NGFRP08138 427 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 UCHL1P09936 223 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CT45A8P0DMV1 189 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CT45A9P0DMV2 189 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 GABRA3P34903 492 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ACTC1P68032 377 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ACTA1P68133 377 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 POU6F2P78424 691 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 TCF15Q12870 199 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 FHL1Q13642 323 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 AANATQ16613 207 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CCDC157Q569K6 752 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CT45A2Q5DJT8 189 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 TMEM65Q6PI78 240 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 RTL4Q6ZR62 310 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 NLRC3Q7RTR2 1065 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CMTM4Q8IZR5 234 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 FAM98AQ8NCA5 519 aaKnown RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF671Q8TAW3 534 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 LOXL4Q96JB6 756 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 VSTM2LQ96N03 204 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 C7orf50Q9BRJ6 194 aaKnown RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ACTR6Q9GZN1 396 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 PARD6AQ9NPB6 346 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 PNO1Q9NRX1 252 aaKnown RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ANKRD10Q9NXR5 420 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 UBQLN2Q9UHD9 624 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 RCE1Q9Y256 329 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SDK2Q58EX2 2172 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 CFAP47Q6ZTR5 3102 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 EML6Q6ZMW3 1958 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 EFCAB7A8K855 629 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 CLDN4O14493 209 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 CTDSPLO15194 276 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 ADAM11O75078 769 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 SCRG1O75711 98 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 ARL6IP5O75915 188 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 SERPINA3P01011 423 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 IFNA16P05015 189 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 RRASP10301 218 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 FBLP22087 321 aaKnown RBP7.81□□□□□ -1.16
TRIM55-204ENST00000353317 PRKACBP22694 351 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 ACP1P24666 158 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 NAA10P41227 235 aaPredicted RBP7.81□□□□□ -1.16
TRIM55-204ENST00000353317 GRK6P43250 576 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 VEGFCP49767 419 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 SIRPAP78324 504 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 FUT7Q11130 342 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 FTMTQ8N4E7 242 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 SDR9C7Q8NEX9 313 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms