RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 AKR1C4P17516 323 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 AVPR2P30518 371 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 CD80P33681 288 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 PRKCZQ05513 592 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 DHRS2Q13268 280 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 OR2B11Q5JQS5 317 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 NCMAPQ5T1S8 102 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 OR52W1Q6IF63 320 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 OR10K2Q6IF99 312 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 STX12Q86Y82 276 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 C10orf53Q8N6V4 93 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 OR5AK2Q8NH90 309 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 FIBINQ8TAL6 211 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 MYADMQ96S97 322 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 MAP3K3Q99759 626 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 LHX9Q9NQ69 397 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ASH2LQ9UBL3 628 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF106Q9H2Y7 1883 aaKnown RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 PLXNB3Q9ULL4 1909 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 TBC1D3EA0A087X179 549 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 A0A1W2PPE3 182 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 DUXAA6NLW8 204 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 IMPA2O14732 288 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 XRCC3O43542 346 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 CTNSO60931 367 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 AIFM1O95831 613 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 CYB5AP00167 134 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 C6P13671 934 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 TIMP2P16035 220 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 PBX2P40425 430 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 EFNB2P52799 333 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ID2Q02363 134 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 NOGQ13253 232 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 Q3ZCU0 254 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 EIPR1Q53HC9 387 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 LY6G6FQ5SQ64 297 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 MRPL2Q5T653 305 aaKnown RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 RPL13AP3Q6NVV1 102 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF585AQ6P3V2 769 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ARHGAP11AQ6P4F7 1023 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF793Q6ZN11 406 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 MTSS1LQ765P7 747 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 SSX9Q7RTT3 188 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 TAF8Q7Z7C8 310 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 FOXRED2Q8IWF2 684 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ETFBKMTQ8IXQ9 262 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 GABRG1Q8N1C3 465 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 BPIFB2Q8N4F0 458 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 OVCA2Q8WZ82 227 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 PHYHIPLQ96FC7 376 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 NMNAT3Q96T66 252 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 RHOFQ9HBH0 211 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 SIGLEC7Q9Y286 467 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ADAM18Q9Y3Q7 739 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 CPED1A4D0V7 1026 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 EFCAB7A8K855 629 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 RHPN2P1A8MT19 583 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 WASH3PC4AMC7 463 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 SFTA3P0C7M3 94 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 DAOP14920 347 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 NME1P15531 152 aaKnown RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 F2RL1P55085 397 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 INPP5JQ15735 1006 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 LDLRAD1Q5T700 205 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 FIP1L1Q6UN15 594 aaKnown RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 MISPQ8IVT2 679 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 BAP18Q8IXM2 172 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 KLHDC8AQ8IYD2 350 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ACOT4Q8N9L9 421 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF511Q8NB15 262 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 FOXRED1Q96CU9 486 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 SULT4A1Q9BR01 284 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 UTP23Q9BRU9 249 aaKnown RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 NAA11Q9BSU3 229 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 SEC11CQ9BY50 192 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 CPEB1Q9BZB8 566 aaKnown RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 RHBGQ9H310 441 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 CHMP1AQ9HD42 196 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-201ENST00000352993 PRSS16Q9NQE7 514 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 VWA8A3KMH1 1905 aa6.98□□□□□ -1.29
BRCA1-201ENST00000352993 TMEM72A0PK05 275 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 A6NLC8 198 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 KLK3P07288 261 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-201ENST00000352993 GALTP07902 379 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 NME2P22392 152 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 NDUFS1P28331 727 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 FRKP42685 505 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-201ENST00000352993 POU3F4P49335 361 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 NANOS3P60323 173 aaKnown RBP6.97□□□□□ -1.29
BRCA1-201ENST00000352993 SNRPNP63162 240 aaKnown RBP6.97□□□□□ -1.29
BRCA1-201ENST00000352993 IL13RA1P78552 427 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 CAP1Q01518 475 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 ECH1Q13011 328 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 TDGQ13569 410 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 EIF2B1Q14232 305 aaKnown RBP6.97□□□□□ -1.29
BRCA1-201ENST00000352993 Q499Y3 187 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 UBE3DQ7Z6J8 389 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 SYS1Q8N2H4 156 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF561Q8N587 486 aa6.97□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF615Q8N8J6 731 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms