RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 PDZK1IP1Q13113 114 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 RAB12Q6IQ22 244 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 FAM111BQ6SJ93 734 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 SYS1Q8N2H4 156 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 COL26A1Q96A83 441 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 TSPAN10Q9H1Z9 355 aaPredicted RBP17.02■□□□□ 0.32
SCARF1-202ENST00000348987 NIT2Q9NQR4 276 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 ZFP57Q9NU63 452 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 USP36Q9P275 1121 aaKnown RBP17.02■□□□□ 0.32
SCARF1-202ENST00000348987 TRAPPC13A5PLN9 417 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 OR14I1A6ND48 311 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 BCL2L11O43521 198 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 SSX5O60225 188 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 ACTL6AO96019 429 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 GTF2F2P13984 249 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 NFYBP25208 207 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 NDUFS1P28331 727 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 POU4F2Q12837 409 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 ILF3Q12906 894 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCARF1-202ENST00000348987 TAF13Q15543 124 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 CST6Q15828 149 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 TMEM35AQ53FP2 167 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 OR2L5Q8NG80 312 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 SLC2A12Q8TD20 617 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 CDS1Q92903 461 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 SMARCD2Q92925 531 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 PTDSS2Q9BVG9 487 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 POFUT1Q9H488 388 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 THAP10Q9P2Z0 257 aaPredicted RBP17.02■□□□□ 0.32
SCARF1-202ENST00000348987 SCN2AQ99250 2005 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 PRICKLE3O43900 615 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-202ENST00000348987 DNAJB6O75190 326 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 CEACAM5P06731 702 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 OR2T7P0C7T2 308 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 CSNK2A2P19784 350 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-202ENST00000348987 NR0B1P51843 470 aaKnown RBP17.01■□□□□ 0.31
SCARF1-202ENST00000348987 OR1Q1Q15612 314 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 RTL10Q7L3V2 364 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 SLC35F2Q8IXU6 374 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 DND1Q8IYX4 353 aaKnown RBP17.01■□□□□ 0.31
SCARF1-202ENST00000348987 OR52E2Q8NGJ4 325 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 OR2T27Q8NH04 317 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 ZNF681Q96N22 645 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 TMEM106CQ9BVX2 250 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 TO15178 435 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 CALCBP10092 127 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 ARFIP1P53367 373 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 NANOS3P60323 173 aaKnown RBP17.01■□□□□ 0.31
SCARF1-202ENST00000348987 C9orf50Q5SZB4 431 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 GLT8D1Q68CQ7 371 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 OR4N5Q8IXE1 308 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 CDK20Q8IZL9 346 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 OR2L8Q8NGY9 312 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 OR4K13Q8NH42 304 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 RGP1Q92546 391 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-202ENST00000348987 TNFRSF13CQ96RJ3 184 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 CNN2Q99439 309 aaKnown RBP17.01■□□□□ 0.31
SCARF1-202ENST00000348987 TMEM231Q9H6L2 316 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 C14orf105Q9NVL8 296 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 DHCR7Q9UBM7 475 aaKnown RBP17.01■□□□□ 0.31
SCARF1-202ENST00000348987 TNFSF18Q9UNG2 199 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 WDR45Q9Y484 360 aa17.01■□□□□ 0.31
SCARF1-202ENST00000348987 EIF1BO60739 113 aaKnown RBP17■□□□□ 0.31
SCARF1-202ENST00000348987 NDUFS6O75380 124 aaKnown RBP17■□□□□ 0.31
SCARF1-202ENST00000348987 ZFPL1O95159 310 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 KAT7O95251 611 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 EML2O95834 649 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 CD3DP04234 171 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 GJA4P35212 333 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 EIF1P41567 113 aaKnown RBP17■□□□□ 0.31
SCARF1-202ENST00000348987 BTN3A2P78410 334 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 STAC2Q6ZMT1 411 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 DNM1P46Q6ZS02 220 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 TMED4Q7Z7H5 227 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 RANBP3LQ86VV4 465 aaPredicted RBP17■□□□□ 0.31
SCARF1-202ENST00000348987 RAB42Q8N4Z0 105 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 STEAP2Q8NFT2 490 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 TCEAL3Q969E4 200 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 GPR174Q9BXC1 333 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 PLA2G2FQ9BZM2 168 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 YKT6O15498 198 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 OR4E1P0C645 316 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 ADRA2CP18825 462 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 PBX2P40425 430 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 GPM6BQ13491 265 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 PDGFRLQ15198 375 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 RPL13AP3Q6NVV1 102 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 PSRC1Q6PGN9 363 aaPredicted RBP17■□□□□ 0.31
SCARF1-202ENST00000348987 UNQ6126/PRO20091Q6UXV3 157 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 OR7G2Q8NG99 324 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 ZNRF4Q8WWF5 429 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 MOAP1Q96BY2 351 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 SEC22AQ96IW7 307 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 ZNF251Q9BRH9 671 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 ACTRT3Q9BYD9 372 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 MTHFD2LQ9H903 347 aaPredicted RBP17■□□□□ 0.31
SCARF1-202ENST00000348987 MEPEQ9NQ76 525 aaPredicted RBP17■□□□□ 0.31
SCARF1-202ENST00000348987 TMEM74BQ9NUR3 256 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 NCDNQ9UBB6 729 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 ZNF281Q9Y2X9 895 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms