RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CASP12Q6UXS9 341 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 P4HA3Q7Z4N8 544 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 BCDIN3DQ7Z5W3 292 aaKnown RBP16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 TUSC5Q8IXB3 177 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 CYB561A3Q8NBI2 242 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 SLC37A3Q8NCC5 494 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 ST6GALNAC3Q8NDV1 305 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 CNBD2Q96M20 576 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 NMNAT3Q96T66 252 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 ANKRD60Q9BZ19 345 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 FN3KQ9H479 309 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 MED20Q9H944 212 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 CALHM2Q9HA72 323 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 CMC2Q9NRP2 79 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 RASSF1Q9NS23 344 aa16.88■□□□□ 0.29
CHMP4A-201ENST00000347519 COL6A6A6NMZ7 2263 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 CD8B2A6NJW9 211 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 FAM183AA6NL82 134 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 ARHGEF9O43307 516 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 DENRO43583 198 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 IDH3BO43837 385 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 TRMUO75648 421 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 TOXO94900 526 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 GABRA1P14867 456 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 ACVR2AP27037 513 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 NOS3P29474 1203 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 DAP3P51398 398 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 CDC42P60953 191 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 IL5RAQ01344 420 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 CD47Q08722 323 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 CAMK2DQ13557 499 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 LAIR2Q6ISS4 152 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 NPEPL1Q8NDH3 523 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 APH1BQ8WW43 257 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 WNT2BQ93097 391 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 SLC38A2Q96QD8 506 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 HCAR1Q9BXC0 346 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 BCO1Q9HAY6 547 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 HINT3Q9NQE9 182 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 UBAP1Q9NZ09 502 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 KLHL9Q9P2J3 617 aa16.87■□□□□ 0.29
CHMP4A-201ENST00000347519 OR6C68A6NDL8 312 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 PRRG2O14669 202 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 TLX2O43763 284 aaPredicted RBP16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 ZNF432O94892 652 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 SELENOPP49908 381 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 LGALS3BPQ08380 585 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 ITGADQ13349 1161 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 IL18R1Q13478 541 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 MAD2L1BPQ15013 274 aaPredicted RBP16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 RNPS1Q15287 305 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 CARD17Q5XLA6 110 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 LEG1Q6P5S2 330 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 NUFIP2Q7Z417 695 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 C8orf59Q8N0T1 100 aaPredicted RBP16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 GCNT2Q8N0V5 402 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 BBS1Q8NFJ9 593 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 RHOXF1Q8NHV9 184 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 TMEM163Q8TC26 289 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 OR2M2Q96R28 347 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 APOL4Q9BPW4 351 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 IMPAD1Q9NX62 359 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 SH3BGRL2Q9UJC5 107 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 KLHL21Q9UJP4 597 aa16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 PHF3Q92576 2039 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-201ENST00000347519 KALRNO60229 2985 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 MBD3L4A6NDZ8 208 aaPredicted RBP16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 MBD3L3A6NE82 208 aaPredicted RBP16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 MBD3L5A6NJ08 208 aaPredicted RBP16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 FIGNL2A6NMB9 653 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 WBP4O75554 376 aaKnown RBP16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 CLUP10909 449 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 ACADSP16219 412 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 PTGER4P35408 488 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 RBPJQ06330 500 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 FOXF2Q12947 444 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 MRPL49Q13405 166 aaKnown RBP16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 GUSBP1Q15486 140 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 PHYHD1Q5SRE7 291 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 NIPAL3Q6P499 406 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 NCCRP1Q6ZVX7 275 aaPredicted RBP16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 CPOQ8IVL8 374 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 MCEMP1Q8IX19 187 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 TMEM123Q8N131 208 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 MARVELD2Q8N4S9 558 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 SYT14Q8NB59 555 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 OR6X1Q8NH79 312 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 MBD3L2Q8NHZ7 208 aaPredicted RBP16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 CNIH3Q8TBE1 160 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 FBLIM1Q8WUP2 373 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 ZNRF4Q8WWF5 429 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 PTP4A1Q93096 173 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 KCNK17Q96T54 332 aa16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 MRPL13Q9BYD1 178 aaKnown RBP16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 TP63Q9H3D4 680 aaPredicted RBP16.85■□□□□ 0.29
CHMP4A-201ENST00000347519 FREM1Q5H8C1 2179 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 RIIAD1A6NNX1 92 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 ZNF724A8MTY0 619 aa16.84■□□□□ 0.29
CHMP4A-201ENST00000347519 SS18L1O75177 396 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms