RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ZNF813Q6ZN06 617 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 HIST3H2AQ7L7L0 130 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 MDP1Q86V88 176 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 C20orf196Q8IYI0 205 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 GPR32P1Q8NGA4 272 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 OR6T1Q8NGN1 323 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 OR6S1Q8NH40 331 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 TSPEARQ8WU66 669 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 NEU4Q8WWR8 484 aaPredicted RBP10.78□□□□□ -0.68
SGCA-202ENST00000344627 STON2Q8WXE9 905 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 HIST1H2ACQ93077 130 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 TXNDC15Q96J42 360 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 ARHGDIGQ99819 225 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 ECSITQ9BQ95 431 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 SIKE1Q9BRV8 207 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 TMEM43Q9BTV4 400 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 TMEM120AQ9BXJ8 343 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 ULBP2Q9BZM5 246 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 RAB1BQ9H0U4 201 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 NELFAQ9H3P2 528 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 ZNF385DQ9H6B1 395 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 KAT8Q9H7Z6 458 aaKnown RBP10.78□□□□□ -0.68
SGCA-202ENST00000344627 SEC61A2Q9H9S3 476 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 CRNNQ9UBG3 495 aaPredicted RBP10.78□□□□□ -0.68
SGCA-202ENST00000344627 USP22Q9UPT9 525 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 MXRA5Q9NR99 2828 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 SH3PXD2BA1X283 911 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 ZNF99A8MXY4 864 aaPredicted RBP10.77□□□□□ -0.69
SGCA-202ENST00000344627 PLPP3O14495 311 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 CHP2O43745 196 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 FMO6PO60774 539 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 CH25HO95992 272 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 C8BP07358 591 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 VIMP08670 466 aaKnown RBP10.77□□□□□ -0.69
SGCA-202ENST00000344627 UMPSP11172 480 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 CD247P20963 164 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 PCGF2P35227 344 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 PIGFQ07326 219 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 MST1LQ2TV78 715 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 SWT1Q5T5J6 900 aaKnown RBP10.77□□□□□ -0.69
SGCA-202ENST00000344627 METTL21CQ5VZV1 264 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 SNX32Q86XE0 403 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 RBM45Q8IUH3 476 aaKnown RBP10.77□□□□□ -0.69
SGCA-202ENST00000344627 TMEM123Q8N131 208 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 ANKS4BQ8N8V4 417 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 NUP37Q8NFH4 326 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 OR5J2Q8NH18 312 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 ADAMTS16Q8TE57 1224 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 HPS1Q92902 700 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 ZNF442Q9H7R0 627 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 SLC7A7Q9UM01 511 aa10.77□□□□□ -0.69
SGCA-202ENST00000344627 STAB1Q9NY15 2570 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 TRAPPC13A5PLN9 417 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 hCG_2039718K7EN88 272 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 ATP8B1O43520 1251 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 RNF13O43567 381 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 FZD7O75084 574 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 MT-ATP6P00846 226 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 IGKV3-15P01624 115 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 IGLV1-44P01699 117 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 HLA-HP01893 362 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 APEHP13798 732 aaKnown RBP10.76□□□□□ -0.69
SGCA-202ENST00000344627 IFNGR1P15260 489 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 THBS4P35443 961 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 ARR3P36575 388 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 CSNK1A1P48729 337 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 ARFIP2P53365 341 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 BIDP55957 195 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 HGFACQ04756 655 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 GGTLC2Q14390 218 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 NPTX1Q15818 432 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 ADIPOQQ15848 244 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 VMACQ2NL98 169 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 TRMT5Q32P41 509 aaKnown RBP10.76□□□□□ -0.69
SGCA-202ENST00000344627 IQCCQ4KMZ1 466 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 KRT80Q6KB66 452 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 NANOGP8Q6NSW7 305 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 SPATA21Q7Z572 469 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 PXKQ7Z7A4 578 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 MYPOPQ86VE0 399 aaPredicted RBP10.76□□□□□ -0.69
SGCA-202ENST00000344627 OR4D11Q8NGI4 311 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 TAMM41Q96BW9 452 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 SLC41A3Q96GZ6 507 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 LRR1Q96L50 414 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 SORCS2Q96PQ0 1159 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 SH3GL1Q99961 368 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 PLK3Q9H4B4 646 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 NANOGQ9H9S0 305 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 NANSQ9NR45 359 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 CUBNO60494 3623 aa10.76□□□□□ -0.69
SGCA-202ENST00000344627 IGHV2OR16-5A0A0B4J2B6 119 aa10.75□□□□□ -0.69
SGCA-202ENST00000344627 LOC100289279A0A1B0GTE1 492 aa10.75□□□□□ -0.69
SGCA-202ENST00000344627 ZNF503-AS2A6NEH8 195 aa10.75□□□□□ -0.69
SGCA-202ENST00000344627 FBP2O00757 339 aa10.75□□□□□ -0.69
SGCA-202ENST00000344627 MRASO14807 208 aa10.75□□□□□ -0.69
SGCA-202ENST00000344627 SASH3O75995 380 aa10.75□□□□□ -0.69
SGCA-202ENST00000344627 B4GALT1P15291 398 aa10.75□□□□□ -0.69
SGCA-202ENST00000344627 ZNF23P17027 643 aa10.75□□□□□ -0.69
SGCA-202ENST00000344627 NPR2P20594 1047 aa10.75□□□□□ -0.69
SGCA-202ENST00000344627 GIFP27352 417 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms